| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0352 |
|---|
| Symbol | |
|---|
| ID | 4711322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 407682 |
|---|
| End bp | 408860 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 639854815 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001001948 |
|---|
| Protein GI | 121997161 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0028801 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGC GGCCCCACGG CGGTGCGGGC GGTTTCCGGG TGCTGCGCCC GGAAATCGGC
AGGCTGGCGT TCCGCCCGGA GGCCTGCCTG CCCCGGCGCA CCCCGCTGTC CGCGTGTCAG
GCCTGCGCCC GGGCGTGTCC GGTGGAGGCC CTGCACCTGG CGAACGGCCC GGCGCAGCTT
ACGGACCACT GCCTGAGCTG CGGGCAGTGT GTCGCGGCCT GCCCCACGGG CGCCCTGCAG
GTACCGGGCT TCGGCGTGGC GGTGGCCGAC GACGCGCCGG CGCGGCTCGA TTGCTACCGG
GTCGATCGGA CGGACGCCGC GGACGTCCGG GTGCCTTGCC TGGGCGGGCT CGGCGCCGCC
GATCTGCTCG AGCTCCATAC CGCCGGCGGC GGCCGGGGGC CCGTGCTGCT GGATCGGGGC
TGGTGCGCCG ACTGCCCGCT GGGCGGCCCC GAACACCCGG CCCAGCGGGC CATCGAGCAG
GCGGCTGATC TGCTGGCCGG GGGCCGGCCC GCCGAAGCCC TTCAGCCCCG CATCGAGACC
GCCCCGCTCC CTTCCGCCCG CGCGCAGGCC CCGCTGCCCG GGGTTGCCGA CGAGGCGCCG
GTGAGCCGCC GCGACCTGCT GCGCCGTCTG GCCGGCCAGG CCGGCGCCAC CGCCCGGGTC
CTGGACGACG ACGCCACCCC CGCGCACACC GCCCCGCTGC GCCACAAGAT CACGCCCCGA
CCGCGTACCC GGATGCTCAA CGCCCTGGCG GCGCTCGGCG TCACGCCACC CCCGGCGCTC
ACCCCCCGGG TGACCATCCA CGGTGGCTGC CAGGATCACG GCGTCTGCGC CGCACTCTGC
CCCACCGGGG CCCTCCACCG GGGCGAGGAG GCCGACGGCA GCGGGCTGGA TTTCGACCCG
GCCGCGTGCA TCGCCTGCCA ACTCTGCCAG CAGGCCTGCC CCGAACAGGC CCTCACCGTC
ACCGCGACGG GCGGCGCCCC GGCGCCGCAT CCGCTGACCC GGCATGCGCA GCGCCCCTGC
GCCGACTGCC AACGCACCTT CCCGGCCGCG GCAGACGAGG CGCTCTGCCC GGCGTGCCGC
AAGTCCCGGG AGTTCGCCCG GGACGCCGCC CAGCGATTCC GCCCGCCTCG CCCGGGGCGC
GGCAGCGACG CAACCGATCC ACAGGAGGAG AGCGCATGA
|
|---|
| Protein sequence | MPERPHGGAG GFRVLRPEIG RLAFRPEACL PRRTPLSACQ ACARACPVEA LHLANGPAQL
TDHCLSCGQC VAACPTGALQ VPGFGVAVAD DAPARLDCYR VDRTDAADVR VPCLGGLGAA
DLLELHTAGG GRGPVLLDRG WCADCPLGGP EHPAQRAIEQ AADLLAGGRP AEALQPRIET
APLPSARAQA PLPGVADEAP VSRRDLLRRL AGQAGATARV LDDDATPAHT APLRHKITPR
PRTRMLNALA ALGVTPPPAL TPRVTIHGGC QDHGVCAALC PTGALHRGEE ADGSGLDFDP
AACIACQLCQ QACPEQALTV TATGGAPAPH PLTRHAQRPC ADCQRTFPAA ADEALCPACR
KSREFARDAA QRFRPPRPGR GSDATDPQEE SA
|
|---|
| |