Gene Hhal_0347 details

Gene Information

• Locus tag: Hhal_0347
• ID: 4711303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 402364
• End bp: 402861
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639854810
• Product: hypothetical protein
• Protein accession: YP_001001943
• Protein GI: 121997156
• COG category: [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1585] Membrane protein implicated in regulation of membrane protease activity

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00770996
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCCGA TGAATGACCC GCAATCGCTG TGGACCGTCT GGCTCACCCT GGCGGTGGTG 
CTGCTCGGCA TCGAGATTCT CCTCGCCGGG GGCGCCGCCG GGGTGCTCAT GGCCCTGGCC 
GTCATGGCCT TCGCCGGTAT GGCCATGGCC CTGTTCGGCG CCCCGCTGGT GGCGCAGATC 
GCCGTGGCCA TCCTGGCCGG GCTGGCCTCT CTGCCGTTCA TGGTCTGGGT CTTCCGGCGT 
ATGGGGCGCG GCGGCGGGCC GCCGTCGGCC GACGACAGCG CCCTGCGCCG CACCGCCTTC 
GAGGCCTACT ACGACGCCCG CGGTCACCTG CGCGTGCGCG CCTTCGGCGA CCACCTGATG 
GCCATCCCCG ACCCCACCGA CCAGCCCGAG ATCGAGCCAG GCAGCGCGGT GCGCATCGTC 
CGGCTGGAGG GGACCCGGGC CATCGTCCGC CCGGTGGATG CCCCGGTGGG GGCACGACTC 
GACGACGCCC AGGCGTGA 

 

Protein sequence

MDPMNDPQSL WTVWLTLAVV LLGIEILLAG GAAGVLMALA VMAFAGMAMA LFGAPLVAQI 
AVAILAGLAS LPFMVWVFRR MGRGGGPPSA DDSALRRTAF EAYYDARGHL RVRAFGDHLM 
AIPDPTDQPE IEPGSAVRIV RLEGTRAIVR PVDAPVGARL DDAQA