| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0335 |
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| Symbol | |
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| ID | 4711295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 385086 |
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| End bp | 386690 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854798 |
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| Product | BCCT transporter |
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| Protein accession | YP_001001931 |
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| Protein GI | 121997144 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.568613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAC CCGATTCGGC GGGTAACCGC CAGGCTGTGC CCGAACGGGA GATTCGCGGC
AACGAACGCA CAGTGATGGT GCTCTCGGGT GGCTTTGTCC TGGCCTTCAT CGCCATCGCG
GCGGTGGACC TGGACTGGCT GAGCGCAGCG GTGGATACCA CCTTCGGCTA CGCCACGCAG
TACTTCGGCG CGTACTGGCA GCTACTGATG CTCGCCACTT TCCTGATCGC CCTGGTCATG
GCCTTCAGCC CGCTGGGCCG GCTGCGGGTC GGCAACGATA AGCCGGATTA CAGCAACTTC
TCCTGGCTGT CCATGATCAT GGCCACGCTG CTCGCCGGTG GCGGCGTCTT CTGGGCGGCC
GCCGAGCCCA TTGCCCACTT CATGGATCCG GCGCCGCTGT TCGCCGCCGA GCTGGGCATC
GAGGGCGGCG AGGAGGGCGC CGCGGTGCCG GCGCTGGCGC AGAGCTTCAT GCACTGGGGC
TTCCTCGCCT GGTCGATCCT CGGGGCGCTG ACCGGCGGCA TGCTCATGCA GCTGCACTAC
CACCGGGGCT GGCCGCTGAA GCCGCGCACG CTGCTCTATC CGCTGTTCGG CGAGCGCATC
ATGCACGGCA CCCCCGGGGC CATCGTCGAC ACCTTCTGTG TGATCGCTGT GGTGGCCGGC
ACCGTGGGGC CGCTGGGCTT TCTCGGGCTG CAGGTGGCCT ACGGCCTGAG CGATCTCTTC
GGGCTGCCGG ATAGCGTCTG GCTGCCGGCG GCGGTGCTGC TGGGGGTGAT CCCGCTCTAT
CTGTTCTCGG CGATCACCGG GCTGAACCGC GGCATCCGCG TCCTCAGCCG CTTCAACGTG
ATGCTGGCGC TCTTCCTGGC CGCCTTCATC CTGCTCTTTG GCCCGACGGC GTTCATCATC
GACGGCTTCG TCCAGGGCAT GGGCACCTAC GTGGATAACC TGCTGCCGAT GGCGACGTTC
CGCGAGGATC CGGCCTGGCT GGACTGGTGG ACGGTCTTCT TCTGGGGCTG GTTCATGGGC
TACGGCCCGC TGATGGCGAT CTTCGTGGCG CGCATCTCCC GCGGGCGCAC CATCCGCCAG
ATCGTGCTGG CCATGTCGGT GCTCGCCCCG GTGGCCACCT GCTTCTGGTT CGCCATCGTC
GGCGGTTCGG GCATCGCCTT CGAGCTGGCC ACGCCGGGTG CCATCTCCGA GCCCTACAAC
GAGGCCGGGC TGCCGGCGGC GATGATGGCC ATCGCCCAGC AGATGCCCTT CGGTGCGATC
ATCGCCGTGC TCTTCCTGGT GCTGACCACC ATCTTCGTGG CCACCACCTC GGACTCGATG
ACCTACACCA TCTCGCTGAC CATGAGCGAG ACCGACGAGC CGGCCACCTG GCTGCGGGTC
TTCTGGGGCC TGGTCCTGGG CGTGATGGCG ATGATCCTCA TGCTCATGGG CGAGGGCGGT
GTCACGGCCC TGCAGTCGTT TATCGTGGTC ACCGCGGTGC CGGTGTCGCT GATCCTGCTG
CCGTCGCTGT GGTACGCCCC GCGCATGGCC ATGCACCTGG CCGACGGCGA GGAGCCGGCT
ATCGACGGTG AAACGGGGCA GTCGGTGAAG CCGACCGGGC GCTAA
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| Protein sequence | MSQPDSAGNR QAVPEREIRG NERTVMVLSG GFVLAFIAIA AVDLDWLSAA VDTTFGYATQ
YFGAYWQLLM LATFLIALVM AFSPLGRLRV GNDKPDYSNF SWLSMIMATL LAGGGVFWAA
AEPIAHFMDP APLFAAELGI EGGEEGAAVP ALAQSFMHWG FLAWSILGAL TGGMLMQLHY
HRGWPLKPRT LLYPLFGERI MHGTPGAIVD TFCVIAVVAG TVGPLGFLGL QVAYGLSDLF
GLPDSVWLPA AVLLGVIPLY LFSAITGLNR GIRVLSRFNV MLALFLAAFI LLFGPTAFII
DGFVQGMGTY VDNLLPMATF REDPAWLDWW TVFFWGWFMG YGPLMAIFVA RISRGRTIRQ
IVLAMSVLAP VATCFWFAIV GGSGIAFELA TPGAISEPYN EAGLPAAMMA IAQQMPFGAI
IAVLFLVLTT IFVATTSDSM TYTISLTMSE TDEPATWLRV FWGLVLGVMA MILMLMGEGG
VTALQSFIVV TAVPVSLILL PSLWYAPRMA MHLADGEEPA IDGETGQSVK PTGR
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