| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0333 |
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| Symbol | |
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| ID | 4709330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 381985 |
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| End bp | 383682 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639854796 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001001929 |
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| Protein GI | 121997142 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000212159 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTACGGA TCGACCGCAG TCTGGCGCTT TCCTTGACGC GTTGGCAGTA CCCCGGTGGC
CTGCAGGGCT GGATGGCCCT GGTCGGGGTC GCTGCCCTGA TCGCCGCCAC CGCGCTGCTG
GTCTGGCAGA CCGGCGGCAT TCAGTACGCC TTTTCCCACA TCATGTATCT CCCCGTCTTG
CTCGGTGCGG CACTGTTCGG TCCGCCCGGG GGAGTGCTGG CCGGTCTCGC CGGCGGTCTA
GCCCTGGGGC CGTGGATGCC CATCGACACC GCCTCCGGCG AGATGCAGGA GCCGCTCAAC
TGGATCTATC GGACGGCCTT CTTCATGTTC GTCGGTGGGG TGGTGGGGAT GCTCGGCCAG
GCGGTTGCCC GCCTGCTCGG CGAGGATCCG GTCAGCGGCG CGCCGAGCCA GCAGCCGTTG
CGCCAGGATC TGGGGCGGAC GCTGGATCCT CCGGTGCCGG GGCGGACCCC GAACCGTCTC
TCGGTGCTGG TGGTCATCTT CGACAACTAC ACCGAGCTGG TGCACACCTT CGGGCCCGAG
GTCGGGGTGC GCCTGATCCG CGGGCTGGTG GGGCGGCTCC AGGCGGCCTG CGGGGCGGAG
GCCCGGGTCT ACCACCTGCA CGGCGAGCGC TTCGCTGTGG TGGTCGATCA GCAGCGGCTC
GAGGCCGTGC GCGCCTGCAT CCGCGAGCAG GCGGCGGAGC CGCTGGTGGC TGGCGGGGTG
CCGCTCTACG TCAATCTGAC CTTCGGCCGC GCCGATTACC CGGAGCACGG CCGGCACGCC
GAGCAGCTCA TCCAGTGCGC CACCATCGCC GGGGATCTGG CCACCCGCCA GGGGGAGCGG
GAGCGGGTCT ACGACGCCAG CAGCGATCAG TCCAGCCGCG AGAACCTGGT GCTGCTCAGC
GGCTTCCGGC GGGCGCTGGC CGGCGGCGAG CTCTGCCTCC ACCACCAGCC CAAGTGGCAC
TTGGGGCGCG AGCGGGTGAC CGGCACCGAG GCGCTGCTGC GCTGGCAGCA CCCGGAGCAC
GGGCTGCTGA CGCCGGTGCG CTTCATCCCG CAGCTGGAGA ACAGCCACCT GATCCACGAG
CTCACGCCGT GGGTGGTCCG CGCCGCGCTC CGCGATCTGG CCGATCTCCA GGCCCGGAGC
CGCGACTGGC AGGTGGCGAT GAACCTCTCC GCTCGCAACC TCAATGACGA CGGCCTGCTC
GGGGATATGG AGCGGGCCCT GGGGGAGACC GGTACCTCGC CGGAGCAGTT GGAGGTGGAG
GTCACCGAGT CGGCGGTGCT GGCCGACCCC GACCGAGCCT CCCGGGTGCT GGGGCGGCTG
CGCGACTGGG GGGTGGGGGT GGCCATCGAC GACTTCGGTG CCGGGCAGAC CTCCCTGGGC
TATCTGCGCC GCCTGCCGGC GAGTACCCTG AAGATCGACC GGAGCCTGAT CTGCCAGCTC
GCCCCCGGGT CGTCGGACCA CCGGATCGTG GAGTCGGTGG CCGGCCTCGG CCGGCGCCTG
GGCATGGAAG TGGTAGCCGA GGGGGTCGAG GACCGGGCCA CCCTGGAGGC GGTGCGGCGC
GCCGGCTGCG ACGCCGTTCA GGGCTACGGG GTCTGCCCCC CGCGGCCGTT GGAGACGGTT
TGCGCCAACT GGGCTCCGCG GGTGGAGCGC CGCGCCGGCC GTGCGATCCG GTCCCCGGGC
GAGGGAGCCG GGAAATAA
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| Protein sequence | MVRIDRSLAL SLTRWQYPGG LQGWMALVGV AALIAATALL VWQTGGIQYA FSHIMYLPVL
LGAALFGPPG GVLAGLAGGL ALGPWMPIDT ASGEMQEPLN WIYRTAFFMF VGGVVGMLGQ
AVARLLGEDP VSGAPSQQPL RQDLGRTLDP PVPGRTPNRL SVLVVIFDNY TELVHTFGPE
VGVRLIRGLV GRLQAACGAE ARVYHLHGER FAVVVDQQRL EAVRACIREQ AAEPLVAGGV
PLYVNLTFGR ADYPEHGRHA EQLIQCATIA GDLATRQGER ERVYDASSDQ SSRENLVLLS
GFRRALAGGE LCLHHQPKWH LGRERVTGTE ALLRWQHPEH GLLTPVRFIP QLENSHLIHE
LTPWVVRAAL RDLADLQARS RDWQVAMNLS ARNLNDDGLL GDMERALGET GTSPEQLEVE
VTESAVLADP DRASRVLGRL RDWGVGVAID DFGAGQTSLG YLRRLPASTL KIDRSLICQL
APGSSDHRIV ESVAGLGRRL GMEVVAEGVE DRATLEAVRR AGCDAVQGYG VCPPRPLETV
CANWAPRVER RAGRAIRSPG EGAGK
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