| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0325 |
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| Symbol | |
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| ID | 4711273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 367085 |
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| End bp | 368305 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639854785 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001001921 |
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| Protein GI | 121997134 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0496164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAGT TCCACTACCG CGGGCGCACC GGCGCCGGAC AGATCCGCGA GGGGACCGTC
GAGGCGGTCT CGGTCTCGGC AGCCGCCGAC GAGGTCTTCG ACCGCGGCAT CACGCCCATC
GAGGTGCGCC CCGCCGCGGC CGGCGGCGGC AGCCTGGACG CCTTCATCCG GCAGCTCAGC
GAGCGGGCGG TCACCCTGGA CGAGCTGGTG ACCTTCACCC GGCAGTTCCG CGCCCTGCTG
CGCGCCGGCG TGCCGGTGGT CCGCGCCCTG CGCGGGCTCG GGCAGAACAC CGCCAACGCC
CGCCTGGGCC GCACCCTGGA GGAAGTGGCC CAGGGCCTGG AGAGCGGCCA GACACTGTTC
GACGCCATGA GCCGCCACCC CAAGACCTTC CCGCGCCTGC TGCTGGCCAT GATCCGCGTC
GGCGAGGAGA GCGGGCAGCT CGAGGAGTCC CTGGAGCGCA TGGCGGCCAG CCTGGATCAG
GAGCGCACCA CCCGCGAGCG GATCAAGGCC GCGCTGCGCT ACCCGACCTT CGTGATGATC
GCCATCATCG CCGCCCTGGT GGTGATCAAC CTCTTCGTCA TCCCGCCCTT CGCCGACCTC
TTCGACGGCA TGGGCACCGA CCTGCCGGCG ATGACCGCGC TGCTGATTGG CTTCTCGGAG
GGCTTCGTCG AGTACTGGCA GTGGCTCTTC GGCGGCGCGC TGGTGGTGGG CCTGGGCGTG
CGCGCCTCCA TCGGCACCGA CGAGGGCCGA TTGCGCTGGG ATTACCTCAA GCTGCGCCTC
CCCGGCGTGG GCAGCATCAT GCGCCGCGCG CTGCTGGCGC GCTTCGCCCG CACCTTCTCC
ATGGCGGTGC GCTCCGGCGT ACCGCTGCTC CAGGCCATGG ACTCCGTGGC CGAGGCCACC
GATAACGCCC ACATCGCCCG CGGCATCCGC GACCTGCGCA CCGGCATCGA GCGCGGCGAG
GGGCTCTACC AGGTGGCCGA GCGCAGCGGC CTGTTCACGC CCCTGGTCCT GCAGATGCTC
GCCGTGGGCG AGGAGACCGG CCAGGTGGCG GACATGATGG ACCAGGTGGC CGAGTTCTAC
GAACGCGAGG TGGAGGAGGA CCTGAAGAAG CTCTCCTCCT ACATCGAGCC GTTCGTCATC
GGCTTCATCG GCGTCCTGGT CCTGATCCTG GCCCTGGGCA TCTTCATGCC CATGTGGCAG
ATGGGCGCCG CCGCCATGTG A
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| Protein sequence | MPKFHYRGRT GAGQIREGTV EAVSVSAAAD EVFDRGITPI EVRPAAAGGG SLDAFIRQLS
ERAVTLDELV TFTRQFRALL RAGVPVVRAL RGLGQNTANA RLGRTLEEVA QGLESGQTLF
DAMSRHPKTF PRLLLAMIRV GEESGQLEES LERMAASLDQ ERTTRERIKA ALRYPTFVMI
AIIAALVVIN LFVIPPFADL FDGMGTDLPA MTALLIGFSE GFVEYWQWLF GGALVVGLGV
RASIGTDEGR LRWDYLKLRL PGVGSIMRRA LLARFARTFS MAVRSGVPLL QAMDSVAEAT
DNAHIARGIR DLRTGIERGE GLYQVAERSG LFTPLVLQML AVGEETGQVA DMMDQVAEFY
EREVEEDLKK LSSYIEPFVI GFIGVLVLIL ALGIFMPMWQ MGAAAM
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