| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0322 |
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| Symbol | |
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| ID | 4711264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 363587 |
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| End bp | 364726 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639854782 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001001918 |
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| Protein GI | 121997131 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00211784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC TTACTGAACA ATCAATTAAA AAGGAGTTTG CGAAGAAGAG AAAGAAAGTT
TTGTCTGACC GAAAGGCTCC TGGCCTTATC GTAGAAGTAA GACCGACTGG TTCGGCAACG
TACTTTTATC GTTACCGCAA TCATGCCGGA CTGACGAGAT CATGCAAGCT TGCACGTTTT
AGAGAGATTA GTTTAAAAGA TGCCAGAAGC CTTGCAAGAG AAAAGGCCAG TATTGTGGCA
TCTGGGCATG ATCCACAGGA AGAAAAGAAC ACTCGCAGAG CGTCCCCGAC ATTGAAGGAA
TATGCTGAAG AGTGCTACCT CCCGCATGCT AAAAGTTACA AAAGGTCATG GAAAACGGAC
GAGATCATGC TCAACCATCA TGCCCTTCCA ACCCTCGGAA CAAAAAAGAT GTCAGATATC
AACAGAAACC AAGTTGAGGC CATCATGAAT GACATGAAAA GCAGAGGTTA CGCACCTTCG
ACTGTGGATC GTGTTTTAAC ACTAATCTCT TATATGTTCA AGGTGGCTAT GGATAACGAA
ATCCCAGGAG TTGTCTCGAA TCCAACCGAG AAGATTAAAA GACCCGTGAT TGATAACAAA
ATTGAGAACT ATCTCACGCG TGAAGAAGTC AACAGAATGC TCGAAGCAGC AAGGAGAAGA
AACCACCCAC ATATTTACTC GATCATTCGG ATGGCTGTCT TGACCGGAGC CAGAAAGGCA
GAGATTCTTT CTGCAAGATT TGAGGATTTC GATCTAGACA ATAAGATTTG GAACATCCCA
AAGGGCAAAA ATGGATCTCG GAAAGTCATT CTGGCTGAGA AGGCCGTTCA AATGGTTAAA
GAACTACCAA AACAAGAAGG GACTGATCTT TTGTTTCCGC AGCCAGGAAC AGACAAGCCG
TATCAGTGCA TCCAAAAGCC CTTTAAAGCT GTTCTTCGGG ATAGCGGGAT TGATGAAAGT
GTCCGGTTCC ATGATCTGCG CCACTCGTAT GCAAGCCTTC TTGTTCAGGG TGGTGTTAAC
ATCTATGAGG TAAAGGAGCT TTTGGGACAT TCACAAATCA CAACGACCAT GAGATATGCA
CATTTGTCTG CCCAGGGTCT TCGCAACCAC AGCAACCGTC TGGCCGAGAC CATCATCTAA
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| Protein sequence | MENLTEQSIK KEFAKKRKKV LSDRKAPGLI VEVRPTGSAT YFYRYRNHAG LTRSCKLARF
REISLKDARS LAREKASIVA SGHDPQEEKN TRRASPTLKE YAEECYLPHA KSYKRSWKTD
EIMLNHHALP TLGTKKMSDI NRNQVEAIMN DMKSRGYAPS TVDRVLTLIS YMFKVAMDNE
IPGVVSNPTE KIKRPVIDNK IENYLTREEV NRMLEAARRR NHPHIYSIIR MAVLTGARKA
EILSARFEDF DLDNKIWNIP KGKNGSRKVI LAEKAVQMVK ELPKQEGTDL LFPQPGTDKP
YQCIQKPFKA VLRDSGIDES VRFHDLRHSY ASLLVQGGVN IYEVKELLGH SQITTTMRYA
HLSAQGLRNH SNRLAETII
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