| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0321 |
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| Symbol | |
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| ID | 4711259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 362433 |
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| End bp | 362990 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639854781 |
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| Product | hypothetical protein |
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| Protein accession | YP_001001917 |
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| Protein GI | 121997130 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0183031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATCGTTC GTAAACGACT GTTCTGCAAG GGAATATCGG AACGCTGCTG TTTATGGCTC
ATTGAACTGG CCATGAACTT CGTCCACCGC CATAGCAGCG AGCAACGCCA GCGTCGTCAG
CGTCAGGAAG GCTTTACGCT GATTGAGTTG GTGATTGTTC TGGTGGTGCT GGGTATTTTG
GCGGCGATTG CGGTGCCGCA GTTTATCGGT GTGCAAGAAA GGGCAACAAT TACCAGCTAC
ACTTCTGCGA TGGCCGCCGA GCTTCAGAAC GCCAATGTTC AGAACCGCAT GAGGGGCGAA
GGTTCCAACT CTAATTTGCC AACAAATTGC GACTTTGAAG GCGGGGATTT TAACACTTTT
ACTGGTGGCA GTGTTGTGGA CGGAATAGAT GTGTCCGGTT ACGAATTCGT GACCGATGAG
GAGCCGGAAA GTTATATTGG TCGGTATACC ATCCCTGATC TAGACGGCGG GACGGATCCA
ACCCGTTGTT ATGTTGTTGA AACTGATAGT AATGGCGAAA ATGGCGAAAA TGGCGAAGGC
GGTGATGACG ATGCTTAG
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| Protein sequence | MIVRKRLFCK GISERCCLWL IELAMNFVHR HSSEQRQRRQ RQEGFTLIEL VIVLVVLGIL
AAIAVPQFIG VQERATITSY TSAMAAELQN ANVQNRMRGE GSNSNLPTNC DFEGGDFNTF
TGGSVVDGID VSGYEFVTDE EPESYIGRYT IPDLDGGTDP TRCYVVETDS NGENGENGEG
GDDDA
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