Gene Hhal_0314 details

Gene Information

• Locus tag: Hhal_0314
• ID: 4711248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: -
• Start bp: 355452
• End bp: 357407
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639854774
• Product: hypothetical protein
• Protein accession: YP_001001910
• Protein GI: 121997123

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.358502
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGGTTC TCAAGGTGAG CAGTCCCATC CCCCGCGTCT GCTGGCTGGC ACTGATCCTG 
GCCGCCTTCC TGACGGCCGG TTGTATCAGT GACAGCGATG ACGACGATGA TGCGAGTTCG 
GAGACCCAGG AGGAGTCGGG GGAGAACGGT GACGAAGACG ACGGTGATGA TGATCCACTG 
CCGCCCTCCG AGCCGTCCGA TAAAGCGCTG CAAATCGGCG CGTGGGGTGA CGGTGGTGAG 
TTTGAATCGG GTTCGCTGAC CTTCGGCCTG GACGGCATCG GCCCCAGTGG GACGACCTCG 
GTCGAGGCGG TCGTGGTCGA TGAGGATGTT GATCCGGTCG GCGAAGATGA CAACGTCCAG 
GTGCGGTTCA CCTCGGACTG TGTCGAGGCG GAGGAGGCTG CGTTCAGCCA GAGCCGCGTG 
GAGGTCATCG ATGGGGTCGC GCAGACCGAT TACACCGCGC AAGGGTGTGC GGAGAGCGAT 
ACCATCCGCG CCGAGGTGGA GTTGACCGAT GAGACGATCC AGGCCTCGGC GGACCTGCGG 
ATCCTCAATA TCGGGTCACT GGTTTTCGAG GAAGCGGATC CGGAGCACAT CGGTCTGGAA 
GGGATGGCCG GGGTGCGGGA AACCACCTCC AACGTTCGCT TCCAGCTGCT GGACGTGTAC 
GGCGATCCCA TCGAGGGCGA ACGGATCGAG TTCGAGGTGA CGCCCAAGAC GGGAGGGCTG 
GAGCTCGATC GGACCAGCGC GCGCACCGAC GAAGAGGGGC GAGTATCGGC CCAGGTTCTG 
GCGGGCACGG TTGCGACGCC GGTCCGTGTG ACTGGGCGTG TCCAGGGCAA TCCCAATATC 
GCGGGTCAGT CTGAGCGGCT CTGGGTCAGC ACGGGGATCC CCACGGAGGA GGGCCTGTCG 
CTCTCTGCCG AGCGTCTGAA CGCCGATGCG TGGAGTTGTG ACGGTGAAGT CGTCGAAATC 
ACCGTTCGTG CCCGTGACCG GTTCTCAAAC CCGGTGATCG ACGGGACGAC CATCAACTTT 
TCCACCCAGG GTGGCGCCAT CGAGCCGAGC TGCCAGACAG AGGATGGGGT GTGCACCGTC 
GAGTGGCGAA GCCAAAACCC GCGTCCGGAG ACCGGACGCA CGACCATTCT GGCCTACGCG 
ATTGGCGAGG AGAGTTTCCT CGACCACACG GGGGACGGCC GATTTGGTCG GGCCGAGGCA 
GAGGCCTGGG TGGATGCGAG GGACGACGAC GACAAGGACA AGAACCAGAT CTGGGCCGAT 
ACCGGTGAGC CGTTCCGCGA CGATCACGAG CAGTGGTTCG ATGAACCCAT GGACTACGCC 
TCTGAAGAGT TCACCCCCGG GGTGGATGGG ATCTTCTTCG ACTTCGATGG CAGCAGCCTC 
GCATCCGAGG GGTACGACTT TGAGGAGAGC AACAGCGGGA CCTGGACAGG GCCGAACCAA 
AAGTTTGATG GCCTCCTCTG CAAAGAGGAT GAGCTAGAGA GTGTTCCAGA GGTTGGGTGT 
GGTGAGGACT TCGCGGGTAT CGGTGCGCAG ACGGTCCTGG TGATGTCGGG TCGTCTGCCG 
TTCAGGATCG AGCCAGAGAG CGATGAGGAT GTCGTCCTCG AAGACGGTGC CAATGATGTA 
ACCTTCGTCG TCCGTGATGG CAATGACCAA CCGCTCCCGG CCGGCACGGA GGTCCGCATC 
GATGCCACCG TCTATCAGAG CAGGATCGAC GAGGACTTTG ATGTCGATCT GGTCCTGGGG 
CCCCGGAGCT TGACCGTCGG CAGCACCAAC CAGGATTCGT CAGCGGACGA CTGGAGTGGG 
GAAGAGGGCG TGGATGAGTT CACCTTCACG CTCAGGCCGC TGCCGGATGG GCTCGAGGAT 
GGGTGGCCGG TGGTCATCGA AGTGGAGACG CCCGGCGAGG CCTGCTGGCC GGTGCAGCGG 
AGCCGCTCCA TCTCCGTGAA GAGCCCCGAC CCGTAA 

 

Protein sequence

MEVLKVSSPI PRVCWLALIL AAFLTAGCIS DSDDDDDASS ETQEESGENG DEDDGDDDPL 
PPSEPSDKAL QIGAWGDGGE FESGSLTFGL DGIGPSGTTS VEAVVVDEDV DPVGEDDNVQ 
VRFTSDCVEA EEAAFSQSRV EVIDGVAQTD YTAQGCAESD TIRAEVELTD ETIQASADLR 
ILNIGSLVFE EADPEHIGLE GMAGVRETTS NVRFQLLDVY GDPIEGERIE FEVTPKTGGL 
ELDRTSARTD EEGRVSAQVL AGTVATPVRV TGRVQGNPNI AGQSERLWVS TGIPTEEGLS 
LSAERLNADA WSCDGEVVEI TVRARDRFSN PVIDGTTINF STQGGAIEPS CQTEDGVCTV 
EWRSQNPRPE TGRTTILAYA IGEESFLDHT GDGRFGRAEA EAWVDARDDD DKDKNQIWAD 
TGEPFRDDHE QWFDEPMDYA SEEFTPGVDG IFFDFDGSSL ASEGYDFEES NSGTWTGPNQ 
KFDGLLCKED ELESVPEVGC GEDFAGIGAQ TVLVMSGRLP FRIEPESDED VVLEDGANDV 
TFVVRDGNDQ PLPAGTEVRI DATVYQSRID EDFDVDLVLG PRSLTVGSTN QDSSADDWSG 
EEGVDEFTFT LRPLPDGLED GWPVVIEVET PGEACWPVQR SRSISVKSPD P