| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0313 |
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| Symbol | |
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| ID | 4711247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 354191 |
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| End bp | 355309 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639854773 |
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| Product | twitching motility protein |
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| Protein accession | YP_001001909 |
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| Protein GI | 121997122 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5008] Tfp pilus assembly protein, ATPase PilU |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATTC AGGCCCTCCT CGCCCAGGCC GTCGCCCGCC AGGCCTCGGA CCTGTTCATC
ACCGTGGGCA GCCCGCCGGC GCTGAAGATC GACGGCGCCC TGACCCCGCT GACCGACCAA
CCGCCCCTCT CCTCCGAGGC GGTCAACGCC CTGGTGGCGG CGACCCTCAA CGACACCCAG
CAGACGGCCC TGGCGCAGAC CCGCGAGGCG AACTTCGCCA TCGTCCTCGA CGACGGGACA
CGGTTTCGGG TCAGCGCCTT CTACCAGCGC GGCGAGCCGG GGCTGGTCAT CCGCCGCATC
GAGACGCAGA TCCCCACCCT GGAGGAGCTG GCCCTGCCCG GGATCCTCGG CGAGCTGGCC
GGGCGCAAGC GCGGGCTGAT CCTCTTCGTC GGCGGCACCG GCACGGGCAA GTCCACCTCC
CTGGCGGCGA TGATCGGCGC CCGCAACACC CACCACCCGG GGCACATCCT CACCATCGAG
GACCCGGTGG AGTTCATCCA CCCTCACCGG CGCAGCATCG TCACCCAGCG CGAGGTGGGC
GTGGACACCG ACAGCTTCGA GACCGCCCTG AAGAACGCCC TGCGCCAGGC GCCGGACGTG
GTGCTCATCG GCGAGGTGCG CTCCCGCGAG GTGATGGACT ACGCCGTCGC CTTCGCCGAG
ACCGGCCACC TGACCCTGGC CACCCTCCAC GCCAACAACG CCAACCAGGC CCTGGACCGG
ATCATCAACT TCTTCCCCAG CGACCGGCGC GAGCAACTGC TCATGGACCT GTCGCTGAAC
CTGCAGGCCA TCGTGGCGCA GCAGCTGATC CCCGCCGCCG ACGGCCGTGG CCGCGTCGCC
GCCCTGGAGG TCCTGCTCAA CACGCCGCTG ATCCAGGAGC GCATCCGCAA CGGCGCCATT
CACGAACTCA AGGCGACCAT GGCGCAGTCG GAAGAGCCCG GCATGCAGAC CTTCGACCAC
CACCTCTTCG AGCTCTACAG CGCCGGACGG ATCCGCTACG AGGACGCCCT CGCCCACGCC
GACTCGGCCA ACGAGGTGCG GCTGCGGGTG AAGCTGGAGG GGGAGGATCC CACGGGGCCG
GAGTCGGACG ACGGGCCGGG GCTGCGGCTG CGGGATTGA
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| Protein sequence | MDIQALLAQA VARQASDLFI TVGSPPALKI DGALTPLTDQ PPLSSEAVNA LVAATLNDTQ
QTALAQTREA NFAIVLDDGT RFRVSAFYQR GEPGLVIRRI ETQIPTLEEL ALPGILGELA
GRKRGLILFV GGTGTGKSTS LAAMIGARNT HHPGHILTIE DPVEFIHPHR RSIVTQREVG
VDTDSFETAL KNALRQAPDV VLIGEVRSRE VMDYAVAFAE TGHLTLATLH ANNANQALDR
IINFFPSDRR EQLLMDLSLN LQAIVAQQLI PAADGRGRVA ALEVLLNTPL IQERIRNGAI
HELKATMAQS EEPGMQTFDH HLFELYSAGR IRYEDALAHA DSANEVRLRV KLEGEDPTGP
ESDDGPGLRL RD
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