| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0312 |
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| Symbol | |
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| ID | 4711246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 352815 |
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| End bp | 354179 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639854772 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001001908 |
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| Protein GI | 121997121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCAG AAGAGAGCCG CGCAGACAAG GAAAGCTCGA ACCAACTGAT CCGCCGGGCG
CTGGAGGAAC TCGACCGAGC CTTCACTGGC CCACCGGTTG CCGAGCCGGA GGACCAGCAG
CTGAGACTGG CGCTGCCCGC GCTGGTGCTC GCCACGGAAG TGGCCGCCAT CGCCGTGCTC
GACGGCCAAG GCGGCATCGT CTTCGCCAGC CCCCAGGCGC GCAAGCTGCT CGGGCTCGAC
CAGACCGCCA CGCCGGAAGA CGGCCACGCC CCGGCACCGC CGGCCGAGAT CCTCGCCTTC
CGCCTGGTGG CCATCACCGG CACCCCCCTG TCCGACGCCC GTTGCGAGAT CGCCGTCGGG
GGCGAAGAGC GGCACGTCCT GTCGATCAAC GCCGCACCGC TGCCGGGGGA TGGTGGCGAC
ACCGCGCTGG TCGCCCTGGC CATGACCGAC CTCACCGAGC AGTACGACTA CTACGAGCGC
GCCCTGCGCG AGAGCGAGCA GCGCCTGAAG CTGGCCACCG AGGCCGCCGG GCTGGGGGTG
TGGGAATACG ACGCCATCAC CGACACCTAC CACTGGGACG AGCGCATGAT GGCCATCTAC
GGCCTGGAGG AATCCCAGCG CCCGGTCACC TACCGCGACT GGGTGGCCCT GCTCGACCCT
GAGCACCACG ACCGCCTGGA GGCGCTCACC CGCCGCGAAC CCACTTACGG CGAACGGCGC
GAGGTGGAGT TCCGCATCCA GCGCCCGGAC GGCCGGACCC GCGATATCCG CGCCGTCTGG
CAGCGCATCG ACGACGAGCA CGGGCGCATC CAGCGCCTGG TGGGCATCAA CGAGGACATC
ACCGAACAGC GCGAGCTGCA CAGCGAGCTG GAGTACCGGG CCGCCCACGA CCCGCTCACC
GACCTGTTCA ACCGGGCCAA GATCCAGCAG CTGCTGCGCG CCGCCCAGGC CGCCTACATC
CGCCACCACA CGCCCTTCGC AGTACTGCTG TTCGACGTGG ACCACTTCAA GCAGGTCAAC
GACCGCTTCG GCCACGCCAC CGGCGACGCG GTCCTCTGGC TCATGGCCCG GCGCATCGAA
TCGGTGCTGC GTGAGACCGA CCACATGGGC CGCTGGGGCG GCGAAGAGTT CCTGATCCTG
GCCAGCCAGA CCGATGAGGC CGGCGCCGAG GTGCTCGCCG AGCGCATCCG GCACCAGGTC
GAGACCACCG CCTTCGAGGG CGTGGGCACG GTGACCATCA GCCTCGGGGT GGCGGCGGCC
GAACCCGGCA CCAGCCTGGA GTCGCTGGAG CAGCGCGCCG ACCGGGCCCT CTACGCGGCC
AAACACCGCG GCCGCAATCG GACGGTCCGC TACTCCCAGC TGTAG
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| Protein sequence | MASEESRADK ESSNQLIRRA LEELDRAFTG PPVAEPEDQQ LRLALPALVL ATEVAAIAVL
DGQGGIVFAS PQARKLLGLD QTATPEDGHA PAPPAEILAF RLVAITGTPL SDARCEIAVG
GEERHVLSIN AAPLPGDGGD TALVALAMTD LTEQYDYYER ALRESEQRLK LATEAAGLGV
WEYDAITDTY HWDERMMAIY GLEESQRPVT YRDWVALLDP EHHDRLEALT RREPTYGERR
EVEFRIQRPD GRTRDIRAVW QRIDDEHGRI QRLVGINEDI TEQRELHSEL EYRAAHDPLT
DLFNRAKIQQ LLRAAQAAYI RHHTPFAVLL FDVDHFKQVN DRFGHATGDA VLWLMARRIE
SVLRETDHMG RWGGEEFLIL ASQTDEAGAE VLAERIRHQV ETTAFEGVGT VTISLGVAAA
EPGTSLESLE QRADRALYAA KHRGRNRTVR YSQL
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