| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0311 |
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| Symbol | |
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| ID | 4711245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 350650 |
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| End bp | 352569 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854771 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001001907 |
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| Protein GI | 121997120 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGAGC CTTCCCGCTA CGGTTGGGAC GACGCGATCA ACGCCGTCCA CAGCCTGGTC
TTCCTGCACG ATGGCGACTA CCGCATCCTG CGGGCCAATC GCGCCTACCT GGAGTGGGCC
GGCGCCTCGA CTGAGGAAGA GGTCATCGGC CGGCCCTATT GGGAGGTCTT CCCCCGTGGT
GACGGCCCCC TGCCGGCGTG CCGCCGGGCC ATGGAGCAGC TCGGCGCCGG ATCCCCCCAG
GCCGGGGATG GCGTCGAGTC CAGCGAGGAG ATCGAGTTGC CGAGTGGCGA GATCTTCCGT
TCGCGCTCCT ACACGGTGCG CGAGGCGGAT GGCAGCTACC GCTGCTCGGT CCACATCCTT
GAGGACATCA CCGAGCAGCG GCGTCTGGAG CAGGCCCGGC AGGGCGCCGA GGCCAAGGTA
AAGGCGATCG CTGCGGCGGC CCGGGACGCC ATTGTGCTGA TCGACGATGA CGACCGCCTG
GTCTACTGCA ACGCCGCCTT CGAGGCGCTG CTCGGCTACG AGGCCGGGGA GCTGGTCGGC
AGCCCCTTCC ACGAACAGGT GGCGCCGAGC CGTTACCGGA CCTCGGCGCG GACGGGGATG
CGCCGCTTCC GGGTCTGCGG GGGTGGGGCG GTGATCGATC AGCGCACCGA GATCGAGGCG
CTCCACCGGG ATGGCCACGA GGTACCGCTG GAGCTCTCGG TCTCGCCGCT GCAGCTCGAC
GGGCGCTGGC ACGCCGTCGG GGTGATGCGG GATATCAGCG AGCGTCGGGC GTTGGAGGTG
GATCGTCAGC GCGCCGAGGC GGATCGCAAT ATCTTCCTGG CGGCGATCAG TCACGACCTG
CGCACGCCGC TCAACGCCAT CGTCGGTTTT ACCGACCTGC TGGCCCGCTC CGAGCTCGAT
ACCGAGCAGC GCCATCACGT CGGGCTGTGC CGCAGCGCCA GTCAGACCCT GCTCGGGCTC
ATCGATACCG TCCTCGAGCT CTCGCGTCTG GAGGCCGGTC GCGTGGAGCT GCGCGACGAG
CGTTTCAACC TGCCGGCGTT CCTGACCACG CAGATCGGTC TGCTTCAGCC CATGGCCGAA
GAAAAAGGCC TATCGCTGAT CTGGTCGCTG GAACCGGACA TGCCCGGCTG GGTGCGCGGC
GATCCGGTAC GCTTCGGGCA GGTTCTCTAC AACCTGGTCA GCAACGCCCT GAAGTTCACC
GAGACCGGCT CGATCCGCGT CGATGGCGCG CGCAGCACCT GCGGGCGTCT GATGTTCACG
GTGGCCGATA CCGGGCCGGG GATCCCCGAG GCGGATCAGG GCCGGATCTT CGACGCCTTC
TGTCAGGGCG GTCCGGTGCT CGCCCGCAAG GAGGGCAGCG GGCTGGGGCT GAAGATCTGC
CAGGAGCTGG TGCGGCTGAT GGGCGGCACC ATCCAGCTGG TGAGCACCCC GGGCGTGGGC
ACCACCTTCC GCTTTACGGT CACGCTGCCG AGCGCGGAAC CGGACCGGGC GGAGGCCGCG
GCGGTGCCGC AGGAGGCCGT GGATACCGAG GCGCCGGTGG GGCAGGGGCT CTGGGTGCTG
GTGGCCGAGG ATGATCCGAC CAACGCCTTG CTGTTCCAGA AGCTGCTGGA GCAGGCCGGC
TGCCATGTGA CGGTGGTCGG CAATGGCCGG GAGGCGGTGC GCCACTGGCA GCGCGCGTCG
CCGGATCTGG TGCTGATGGA TCTGCAGATG CCGGAGGTGG ACGGCCGCGA GGCGACCCGC
CGGATCCGCG CCCGGGAGGC CGAGGACTGG CTGCCGCGCA CCCCCATCGC CCTGGTCACC
GCCCACGCCC TGGACAGCTT CCAGCAGGAG TGTTTTCGCA TCGGTTGTGA TGCCTACCTG
ACCAAGCCCC TGGATCGGGC GGAACTCTGG CAGTTGCTGG CGCGGGTGCG CGCCGCTTAG
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| Protein sequence | MTEPSRYGWD DAINAVHSLV FLHDGDYRIL RANRAYLEWA GASTEEEVIG RPYWEVFPRG
DGPLPACRRA MEQLGAGSPQ AGDGVESSEE IELPSGEIFR SRSYTVREAD GSYRCSVHIL
EDITEQRRLE QARQGAEAKV KAIAAAARDA IVLIDDDDRL VYCNAAFEAL LGYEAGELVG
SPFHEQVAPS RYRTSARTGM RRFRVCGGGA VIDQRTEIEA LHRDGHEVPL ELSVSPLQLD
GRWHAVGVMR DISERRALEV DRQRAEADRN IFLAAISHDL RTPLNAIVGF TDLLARSELD
TEQRHHVGLC RSASQTLLGL IDTVLELSRL EAGRVELRDE RFNLPAFLTT QIGLLQPMAE
EKGLSLIWSL EPDMPGWVRG DPVRFGQVLY NLVSNALKFT ETGSIRVDGA RSTCGRLMFT
VADTGPGIPE ADQGRIFDAF CQGGPVLARK EGSGLGLKIC QELVRLMGGT IQLVSTPGVG
TTFRFTVTLP SAEPDRAEAA AVPQEAVDTE APVGQGLWVL VAEDDPTNAL LFQKLLEQAG
CHVTVVGNGR EAVRHWQRAS PDLVLMDLQM PEVDGREATR RIRAREAEDW LPRTPIALVT
AHALDSFQQE CFRIGCDAYL TKPLDRAELW QLLARVRAA
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