| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0309 |
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| Symbol | |
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| ID | 4711241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 347588 |
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| End bp | 348880 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854769 |
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| Product | arsenical pump membrane protein |
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| Protein accession | YP_001001905 |
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| Protein GI | 121997118 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | [TIGR00935] arsenical pump membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTAG CCGCGATTGC GATCTTCGTC GTCACCATCG CCCTGGTCAT CTGGCAGCCC
AAGGGCCTGG GGATCGGCTG GAGCGCCACC GCCGGCGCCC TGGTCGCGCT GGCCACGGGC
GTCGTCGAGC TCAGCGATGT GCCCATCGTG GTCGATATCG TCTGGAACGC GACCCTGACC
TTCGTGTTCA TCATCATCAT CTCGCTGCTG CTCGACGAGG CCGGCTTCTT CGAGTGGGCC
GCACTCCACG TAGCGCGCTG GGGCAGGGGC AGCGGTCTGC GCCTCTACGC CTTCATCATC
CTGCTCGGTG CCGCGGTGGC GGCGATCTTC GCCAACGACG GCGCGGCGCT GATGCTCACC
CCCATCGTGC TGGAGATGCT GCTGGCTCTG GGCTTCACCG CAGGGGCGGC CTTCGCCTTC
GTGATCGCCG CCGGGTTCAT CGCCGATACC GCCTCGCTGC CGCTGGTCAT CTCCAACCTG
GTGAACATCG TCTCGGCGGA TTTCTTCGGC ATCGGCTTCA AAGAGTATGC GACGGTGATG
GTGCCGGTGA CCGTGGTCTC GGTGGTGGCC TCGCTGGCGG TGCTGACCCT GTTCTTCCGC
AAGCAGATCC CGCGGGTTTA CGAGACCCAC GGGCTGCGCG ATCCGCAGGA GGCGATCAAG
GATCCGGCGG TCTTCAAGGC CGGTTGGGGG GTGCTCGGCC TGCTGCTCTT CGCCTTCCTG
GTGATCGAGC CGATGGGGGT GCCCATCTCG GCGATCGTCG GCGTCGGCGC CGCGATCCTG
CTCGCCGTGG CGGCGCGGGG CCACGCCATC GCCACGCGGA CGGTCCTCAA GAACGCCCCC
TGGCAGATCG TCATCTTCTC GGTGGGCATG TACCTGGTCG TCTACGGCCT GCGCAACGAG
GGGCTGACCG GCGAGGTCGC CGGCCTGCTG GATGTCATCG CCGAGCAGGG TGTGTGGGTT
GCGACGGTGG GGACCGGCTT TATCGCCGCC TTCCTCGCCT CGGTGATGAA CAACATGCCC
GGTGTGATGG TGGTGGCGCT CTCCATCGAT GAATCAGCGG CTACCGGGCT GGTTAAGGAG
GCGATGATCT ACGCCAACGT GGTCGGCTCC GACCTGGGGC CGAAGATCAC ACCCATCGGC
AGTCTCGCCA CGCTGCTTTG GCTGCACGTG CTGGCGCGCA AGGGGGTGCA CATCACCTGG
GCCAAGTACT TCGCCATCGG CATCGTGATC ACGCCGCCGG TGCTGCTGGT CACGCTCCTG
GCGCTGGCGG GGTGGCTGAC GGTGTTGCAC TGA
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| Protein sequence | MLLAAIAIFV VTIALVIWQP KGLGIGWSAT AGALVALATG VVELSDVPIV VDIVWNATLT
FVFIIIISLL LDEAGFFEWA ALHVARWGRG SGLRLYAFII LLGAAVAAIF ANDGAALMLT
PIVLEMLLAL GFTAGAAFAF VIAAGFIADT ASLPLVISNL VNIVSADFFG IGFKEYATVM
VPVTVVSVVA SLAVLTLFFR KQIPRVYETH GLRDPQEAIK DPAVFKAGWG VLGLLLFAFL
VIEPMGVPIS AIVGVGAAIL LAVAARGHAI ATRTVLKNAP WQIVIFSVGM YLVVYGLRNE
GLTGEVAGLL DVIAEQGVWV ATVGTGFIAA FLASVMNNMP GVMVVALSID ESAATGLVKE
AMIYANVVGS DLGPKITPIG SLATLLWLHV LARKGVHITW AKYFAIGIVI TPPVLLVTLL
ALAGWLTVLH
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