Gene Hhal_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0306 
Symbol 
ID4711232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp344088 
End bp345125 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content72% 
IMG OID639854766 
Producthypothetical protein 
Protein accessionYP_001001902 
Protein GI121997115 
COG category[S] Function unknown 
COG ID[COG4307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTCT TCCACTGCGC CTGCGGCAAC CGGCTGCACT TCGGCAACAC CCGTTGCCTG 
AGCTGCGGCC GGGCGCTGGG CTTCGATCCG GCCCGCCGCG CGGTGGTGGC CCTGGACGCC
GGCGCCGACG GGCTCTGGCG GGCCCCCGGG GGCGGCGGGC AGCGCTACCG CAACTGCGCC
AATGTGGTGG CCGCCAGCTG CGACTGGCTG GTGCCGGCGG AAAGCGGCGA CGCCCTGTGT
CTGGCCTGCC GCCTGACCGA CACCATCCCC GACCTGGATA ACGAGCTCAA CCGCATCTAC
TGGGGGCGGC TGGAGGCGGC CAAGCGCTAC CTCATCACCG ATCTGCTGCG ACTCGGCCTG
CCCCTGGCCG ACCGCTGGCA GGACCCGCAG CGCGGCCTGG TCTTCCAGTT CCTGGCGGAT
GCCGATACCC CCGAGGGGCC GCAGCAGATC ATCACCGGTC ACGCCGGGGG GCGGATCACC
ATCAACGTCG CCGAGGCCGA CGAGATCCAC CGGGAGCGCA CCCGCATCGC CTTGGGCGAG
GCCTACCGCA CCCTGCTCGG GCACATGCGC CACGAGATCG GCCACTACTA CTGGATGCGG
CTGATCGAGG GCTCGCCGTG GCAGGAGCGT TTCCGCGCGC TCTTCGGCGA CGAGCGCGAG
CCCTACGAGC AGGCGCTGCA GCGCTACTAC CAGTTTGGCC CCCAGGGGCC GGACTGGGCC
GTGCGCCACA TCAGCGCCTA TGCGGCCTCG CACCCCTGGG AGGACTGGGC CGAGAGCTGG
GCGCACTACC TGCACATCAC CGACGCCCTG GAGACCGCCG GCGTCTACCA GCTCACCGGG
ATGCCGCAGG CGGGGGAGGA CATCGAGCAG CTGCTCGAGC GCTGGCACCA GCTCAGCGAG
GCGCTCAACG CCCTGTCGCG CAGCCTCGGG CAGCGCGATC CCTATCCGTT CAAGGTCACC
GAGCCGGTGG CCGAGAAGCT GCGCTTCATT CAGGAGGTGG TGGGGGCGGC CGGGTCCAGC
GGCGGGGCGG CCAGCTGA
 
Protein sequence
MRLFHCACGN RLHFGNTRCL SCGRALGFDP ARRAVVALDA GADGLWRAPG GGGQRYRNCA 
NVVAASCDWL VPAESGDALC LACRLTDTIP DLDNELNRIY WGRLEAAKRY LITDLLRLGL
PLADRWQDPQ RGLVFQFLAD ADTPEGPQQI ITGHAGGRIT INVAEADEIH RERTRIALGE
AYRTLLGHMR HEIGHYYWMR LIEGSPWQER FRALFGDERE PYEQALQRYY QFGPQGPDWA
VRHISAYAAS HPWEDWAESW AHYLHITDAL ETAGVYQLTG MPQAGEDIEQ LLERWHQLSE
ALNALSRSLG QRDPYPFKVT EPVAEKLRFI QEVVGAAGSS GGAAS