| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0305 |
|---|
| Symbol | |
|---|
| ID | 4711237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 343384 |
|---|
| End bp | 344136 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639854765 |
|---|
| Product | 20S proteasome, A and B subunits |
|---|
| Protein accession | YP_001001901 |
|---|
| Protein GI | 121997114 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3484] Predicted proteasome-type protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACT GCCTCGCCAT CGCTGTGGAT GAAGGCCTGG TCTTCGCCTC CGACAGCCGC
ACCCACGCCG GGGTCGATCA GGTCAGCACC TACAGCAAGA TGTTCGCCTA CGCCCGCCCC
GGCGAGCGGA GTCTGGTGGT GCTCTCCGCC GGCAACCTGG CCACCACCCA GGCGGTGGTC
CGGCGGCTCA ACCGGGACTG GCAGACCGGC GCCGAGCCCT CGCTGGCGAA CACGCCCACC
CTCGAGGACG CCGCCGAGTA CCTGGGTGAG GTCAGCGTCG AGCTGCAGCG CCGCTCGGTG
GAGCAGTCCG GACAGCAGAA CGGCCTGGCG GTGGAGGCCA CCTTCCTCAT CGGCGGTCAG
ATCCAGGGGC AGGCGCCGGG GATCTACATG GTCTATCCCC AGGGGAACTT CATCACCGCC
TCGCCACTGC ACCCGTTCCT GCAGATCGGC GAGACCAAGT ACGGCAAGCC GATCCTCGAT
CGCATCGTCT CCGAGCAGCT GCCACTGGAG CGCGCCGCCA CCTGCGCGCT GATCTCCATC
GACTCGACCA TGCGCAGCAA CCTCTCCGTG GGCCCGCCGG TGGAGCTCCT CACCTACCGG
CGCGACAGCC TCGACCCCGG CCACTACCGG GCCTTCCAGC CGGACGACCC CTACTTCGCC
GACCTACGCG ATGCCTGGCG GGACGGCCTG CAGCAGCTCT TCGATCAGCT GGCCGCCCCG
CCGCTGGACC CGGCCGCCCC CACCACCTCC TGA
|
|---|
| Protein sequence | MTYCLAIAVD EGLVFASDSR THAGVDQVST YSKMFAYARP GERSLVVLSA GNLATTQAVV
RRLNRDWQTG AEPSLANTPT LEDAAEYLGE VSVELQRRSV EQSGQQNGLA VEATFLIGGQ
IQGQAPGIYM VYPQGNFITA SPLHPFLQIG ETKYGKPILD RIVSEQLPLE RAATCALISI
DSTMRSNLSV GPPVELLTYR RDSLDPGHYR AFQPDDPYFA DLRDAWRDGL QQLFDQLAAP
PLDPAAPTTS
|
|---|
| |