| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0297 |
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| Symbol | |
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| ID | 4711205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 333374 |
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| End bp | 334531 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639854757 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001001893 |
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| Protein GI | 121997106 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.277763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATACGC GCCGTTGGGT CTTGTCGGCC CTGATCGGGA CGCTAGCTGT TCCTGGAGCC
GTCCACGCTG GAGATGCCCT GGAGCAATTC CGGGAGCAGC AGCGGGAATC CTTTGACGAC
TTCGCCACCG ATTTCCGCGA GCGCTACGCC GACTTCCGCG ACACCTTCCA CGAAGAGCTT
GAGGCCTATC AGGAGGAGCT CTCCCAGCGC TGGGAAGAGC CGCGGGTCAG TGATCGCCGC
GAGTGGGTTC AGTACGGCGA TGACCAGGCC TCCCGGACCG TCGTCGACTA CGCCCGGAAC
GAGATTGTAG TGGATGTCCC AGGGGAGGGG CGGGAGGCTG TGCAGGCGGC CGCCCAGCGA
CTGGATGAGC TGTTGCAGAC CACCTTGGCC GAAGCCTACG AGGGCGACGA GGTCACCCAG
CGGACGTGGG ATCGACTGGA CATCCCCGAA AGCGAGACCA CCGCAGCCGG CAATTCCGAT
GAGCAGCGGG TGCTCAGCGA GATCTCGGCC GAGGACGTCG AAGAGATGAT GGCCCAAGCC
AAGGCGGAGC AGCGCCAGGA ACCGGAGGGC GATGGTCGAC GCGACATCCT TTCGTTCTCG
GTCCCCATGC CCGAAAGTCG CGCCTCGGAC AAGGCCGAGG AGTTCCGCGA GGATGTGGAG
GCGGAGGCGG AGCGCTACGA CGTGGATCCG GCGCTCATGC TCGCCGTGAT GCACAGCGAG
AGCAGTTTCA ATCCCATGGC CCGTTCCCAT ATCCCTGCCT ACGGGCTGAT GCAGATCGTA
CCTGAGTCGG CGGGCAGGGA CGTGGCGCAG CGGGTCTACG GCGAGCAGCG CCTGTTCTCT
CCGGACTATC TCTATAATCC GGATAACAAC ATCCGCGCCG GCGCCGTCTA CCTCGACATC
CTCGACAGTA GTTACCTGAG CGCCATCGAG GATCCCGAAA GCCGGCTTTA CGCCGTCATC
TCCGCCTACA ACACCGGTGC CGGCAATGTG GCCCGGGCGT TTGTCGACGG CACCAACGTC
TCGGCTGCCG CCGAGGTGAT CAACGACATG AGCCCGGACG AGGTCTACGA GACGCTGGCG
GAGAACCTCC CCTACGAAGA GACGCGCAAC TACCTCGTCA ACGTCGCCAG TCGCCACCAG
GCTTACCGGG ACTTCTAA
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| Protein sequence | MDTRRWVLSA LIGTLAVPGA VHAGDALEQF REQQRESFDD FATDFRERYA DFRDTFHEEL
EAYQEELSQR WEEPRVSDRR EWVQYGDDQA SRTVVDYARN EIVVDVPGEG REAVQAAAQR
LDELLQTTLA EAYEGDEVTQ RTWDRLDIPE SETTAAGNSD EQRVLSEISA EDVEEMMAQA
KAEQRQEPEG DGRRDILSFS VPMPESRASD KAEEFREDVE AEAERYDVDP ALMLAVMHSE
SSFNPMARSH IPAYGLMQIV PESAGRDVAQ RVYGEQRLFS PDYLYNPDNN IRAGAVYLDI
LDSSYLSAIE DPESRLYAVI SAYNTGAGNV ARAFVDGTNV SAAAEVINDM SPDEVYETLA
ENLPYEETRN YLVNVASRHQ AYRDF
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