Gene Hhal_0284 details

Gene Information

• Locus tag: Hhal_0284
• ID: 4711188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 321116
• End bp: 321661
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 639854744
• Product: electron transport complex, RnfABCDGE type, B subunit
• Protein accession: YP_001001880
• Protein GI: 121997093
• COG category: [C] Energy production and conversion
• COG ID: [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
• TIGRFAM ID: [TIGR01944] electron transport complex, RnfABCDGE type, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.419432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGCAG CGATGCTGGT ACTGACCGGA ATGGCGCTAC TCATCGGGTT CCTGCTGGCC 
GTAGCGGCGC AGTACCTGAA GCCGCCGCCG GACGAGACCG CCGAGGCGGT CGAGCGGGTC 
CTGCCCGGCA CCAACTGCGG GCAGTGCGGC CTGCCCGGCT GCAGCATCGG GGCCCAGGCC 
GTGGCCGCCG GGGAGCTACC GGTGAACTTC TGCCCGCCCG GCGGCCGAGC CGTGGCCGAG 
GAGATCGCCC GGATCACCGG TCAGCCCCTG GTCCTCGATG ACGGCGACGA CGGCATCCGC 
CGGGTGGCGC GGGTCACCCG GGAGGACCTG TGCACCGGGT GCCTCAAGTG CATCAAGGCC 
TGCCCGACCG ACGCGGTGAT CGGCGCCCCC AAGCAGATCC ACGGGGTGCT GCCCGAGGCG 
TGCTCGGGGT GCGCGGCGTG CATCGACGTC TGCGCCACCG GGGCGCTGGA GATGGTCCCG 
GAGCCGGTGA CGCTGGCCAA CTGGCGCTGG CCGCGGCCGA CGGAGGCGTA CGACCATGCT 
GCTTAG 

 

Protein sequence

MYAAMLVLTG MALLIGFLLA VAAQYLKPPP DETAEAVERV LPGTNCGQCG LPGCSIGAQA 
VAAGELPVNF CPPGGRAVAE EIARITGQPL VLDDGDDGIR RVARVTREDL CTGCLKCIKA 
CPTDAVIGAP KQIHGVLPEA CSGCAACIDV CATGALEMVP EPVTLANWRW PRPTEAYDHA 
A