| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0282 |
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| Symbol | |
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| ID | 4711184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 318575 |
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| End bp | 320152 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639854742 |
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| Product | transcriptional regulator NifA |
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| Protein accession | YP_001001878 |
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| Protein GI | 121997091 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.262632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACC CCATGCCCGT CGGCCCCCGC GAGCGCGCCC GGGCCGAACT GGTCGAGGCC
CAGCTCGAAG CGCTCTACCA GGTCAGCCGC GTCCTCTCCC GCAGCCTCGA CCTGCGCGAT
ACGCTCCAGG CCGTGCTCGA AGTGCTCCAC GAGCACGCCG ACATGCACTC CGGGATGGTC
GCCCTGCGCG ACCCGGTGCG CCGCGAGACC ATCGTCCGCG CGCTGCACGG TCAGACCCCC
TCCAATGAGG TCATCTACCG TCCCGGCGAG GGGATCGTCG GCGAGATCCT CAACCAGGCC
GAGCCGCTGA TCGTCCGGCG CATCTCCGCA GAGCCTCGGT TCCTCGATCG GCTCGGCCTC
TACGATCCGG ATCTGCCGTT CATCGGCGTT CCCATCAACG GTCCCGGCGA ACACGACCCG
CCGGTGGGCG TGCTCGCCGC GCAGCCCGCC GCCGACGAGG GCGCGTTGCT GGCGGAGCGT
TCGCGGTTCA TGCAGATGGT CGCCAATCTG GTCGCCCAGA CCGTGCGCCT GGCCACCGAG
GTCGAGCGCG AGCAGGCGGC CATTGTCGAT GAGCGCGATC GCCTGCGCCG GGAGGTGCAA
GAGAGCTACG GCTTCGAGAA CGTCATCGGC CGCACCCCGG CCATCCGCCG CGTCTTCGAA
CAGGTGCGCC GGGTCGCACA GTGGAGCACC ACGGTGCTGC TGCGCGGCGA GTCCGGCACC
GGCAAGGAGC TGCTGGCCAA CGCCATCCAC TACAACTCGC CGCGGGCCGA CGCGCCCTTC
GTCAAGCTCA ACTGCGCGGC GCTGCCCGAC AGCCTGCTCG AGAGCGAGCT CTTCGGCCAC
GAGAAGGGGG CGTTCACCGG CGCCGTGCAG AGCCGGGTGG GGCGTTTCGA GCAGGCCGAC
GGCGGCACCA TCTTCCTCGA CGAGATGGGC GAGATCTCGC CGGCCTTCCA GGCCAAGCTG
CTGCGCATCC TCCAGGAGGG GGAGTTCGAG CGGGTGGGCA GCACCCGCAC ACGGCATGTG
GATGTGCGCG TGCTCGCCGC CACCAACCGC GATCTGGAGG CGGCGGTCGC TGCCGGCGAG
TTCCGCGAGG ACCTCTACTA CCGGCTCAAC GTGATGGCCA TCACCATGCC CGCGCTGCGC
GAGCGGCTCG AGGATGTCCC GGAGCTGGCT CGCTTCCTGG TCGGACGCAT CGCCGACGTT
CAGCAGCGGG CGCTGGATAT CTCCGACGAC GCCATCCGTA CGCTGATGCG CTACCACTGG
CCGGGCAATG TCCGCGAGTT GCAGAACGCC CTGGAGCGGG CGGCGATCAT GAGCGAGGAC
GGCCACATTG ATCACGAGGC GCTGCTCCTC GCCGGCATCC CCGAAGACGG TTCGGGGCCC
GCCGGCAATG GAGTCTTGCC TGCCGGGCCG GCGGCGCCGG ATCCCAACGA CCCGGCGCTG
GATGAGCGCG AGCGGGTGAT CGCCGCCCTT GAACGCACCG GCTGGGTGCA GGCCAAGGCG
GCGCGCCTGC TGGGCATGAC GCCGCGGCAG ATCGCGTACC GGATCAAGAC CCTGGATATC
CCGGTGAAGA GCCTGTGA
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| Protein sequence | MENPMPVGPR ERARAELVEA QLEALYQVSR VLSRSLDLRD TLQAVLEVLH EHADMHSGMV
ALRDPVRRET IVRALHGQTP SNEVIYRPGE GIVGEILNQA EPLIVRRISA EPRFLDRLGL
YDPDLPFIGV PINGPGEHDP PVGVLAAQPA ADEGALLAER SRFMQMVANL VAQTVRLATE
VEREQAAIVD ERDRLRREVQ ESYGFENVIG RTPAIRRVFE QVRRVAQWST TVLLRGESGT
GKELLANAIH YNSPRADAPF VKLNCAALPD SLLESELFGH EKGAFTGAVQ SRVGRFEQAD
GGTIFLDEMG EISPAFQAKL LRILQEGEFE RVGSTRTRHV DVRVLAATNR DLEAAVAAGE
FREDLYYRLN VMAITMPALR ERLEDVPELA RFLVGRIADV QQRALDISDD AIRTLMRYHW
PGNVRELQNA LERAAIMSED GHIDHEALLL AGIPEDGSGP AGNGVLPAGP AAPDPNDPAL
DERERVIAAL ERTGWVQAKA ARLLGMTPRQ IAYRIKTLDI PVKSL
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