Gene Hhal_0260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0260 
Symbol 
ID4711114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp299187 
End bp300167 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID639854720 
Producthypothetical protein 
Protein accessionYP_001001856 
Protein GI121997069 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGC CAAGCGATCA GACCGCGTCG CAGCCGCAGA TTCCGGTGGG CGTGAGCAGC 
TGCCTGCTCG GCGAGGAGGT GCGCTACGAC GGCAGTCACA AGCGCAACCC CTTCGTTACC
GAGGCACTCT CGCGCTACTT CCGCTACGTG CCCGTCTGCC CCGAGGTGGC CATCGGGCTG
CCCACCCCGC GGCCGCCGAT CCGCCTGGAG CTGGATGCGG ACAACCGGGT GCGCGTGCGC
GGGGTGCGGG ATCGGCAGAC CGACGTCACC GAGGCCATGG AGGCCTTCGG CCGCGAGAAG
GGGCGGGAGC TCCACTGGCT CAGCGGCTAC ATCCTCAAGG CCAAGTCGCC GAGCTGCGGT
ATGGAGCGCG TCAAGGTCTA CAAACCCGAC GGCCATCCGG CCGGTATCCC CGGGCGGGGC
GCCTATGCAC GGACGCTGAT GGAGGCCAAC CCACTGCTCC CGGTGGAGGA GGAGGGACGG
CTCAACGATC CGTCCCTGCG TGAGGGCTTT GTCTGCCGGG TCTTCTGCTA CTACCGTTGG
CAGCGCCTGG TCGAGGCGGG CCTGACGCCC AAGGCGCTGG TGGATTTCCA CGCCGAGCAC
AAGCTGTTGC TCATGGCCCA CGACGATCAG CGCATGCGCG AGCTGGGGCG GCTGGTCTCG
ACGCTGGGCG AGCGGTCGCT GGAGGCGGTG GCCGACGAGT ACATCCACGG GTTCATGGCG
GCCCTGGCCC GGCCGGCGAC GCGCGGCCGG CACGCCAACG TGCTCTACCA CCTGCTCGGC
TATCTCAAAC GCGAGCTGGA CCCGGCGGAC AAGCAAGAGG TGGTGAGTGT CATCGAGCAG
TACCGCACCG GTATGGTGCC GTTGATCGTC CCGGTGATGC TGTTGCGTCA CCACTTCCGC
CACTGGCCGG ATCCCTATGT GGAGCGGCAG TTCTATCTCT ACTGGAGTCC GCCGGAACTG
GCGCTGCTCA ATCAGGTCTG A
 
Protein sequence
MSRPSDQTAS QPQIPVGVSS CLLGEEVRYD GSHKRNPFVT EALSRYFRYV PVCPEVAIGL 
PTPRPPIRLE LDADNRVRVR GVRDRQTDVT EAMEAFGREK GRELHWLSGY ILKAKSPSCG
MERVKVYKPD GHPAGIPGRG AYARTLMEAN PLLPVEEEGR LNDPSLREGF VCRVFCYYRW
QRLVEAGLTP KALVDFHAEH KLLLMAHDDQ RMRELGRLVS TLGERSLEAV ADEYIHGFMA
ALARPATRGR HANVLYHLLG YLKRELDPAD KQEVVSVIEQ YRTGMVPLIV PVMLLRHHFR
HWPDPYVERQ FYLYWSPPEL ALLNQV