| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0243 |
|---|
| Symbol | |
|---|
| ID | 4711071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 279182 |
|---|
| End bp | 280216 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639854703 |
|---|
| Product | succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_001001839 |
|---|
| Protein GI | 121997052 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00932819 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGGC GGCGGCGCAG TGCCTTCGTG ATCAGCGATC AGGCCGTGCC CCCGGGGGAG
CGGCGCACCG TGCAGCTCGA CGTGGCGCAG CTCTACACCC ACACCCCGGT GGGCATGCCG
GTGCACGTGG TCCACGGCCG CCGCGACGGC CCCACCCTGT GCCTGAGCGC CGCCATCCAC
GGCGACGAGA TCAACGGCAT CGAGATCATC CGCCGGGTGC TGGCGCTGCC GCAGCTGCGC
CGGATGCGCG GCACCCTGCT GGCGGTGCCC ATCGTCAACG TCTTCGGGGT GCTGGCGCAG
ACCCGCTACC TGCCGGACCG CCGCGACCTC AACCGCTCCT TCCCGGGCAG CGCCGGCGGC
TCGCTGGCGG CGCGGCTGGC TCACCTGTTC ATGAGCCAGG TGCTGGAGCG GGCCTCCCAC
GCCATCGACC TGCACACCGG CACCGCCCAC CGCACCAACC TGCCGCAGAT CCGCGCCAAC
CTCGACGACC CCGGCACCCT GGAGCTGGCG CGGGCCTTCT CGGCGCCGGT GATCATCAAC
TCCGACCTGC GCGACGGCTC GCTGCGCCAC GCCGCCGACG AGCGCGGCAT CCCGGTGCTA
CTCTACGAGG CCGGCGAGGC GCTGCGCTTC GACGAGGACT GCATCCGCCT CGGGGTGCGC
GGGATCACCG GCGTGATGCG TGAGCTGGGC ATGCTCCCGC GGGTCAAGCG CAAGTACCCG
CCGCGCCGGC CGGTCCAGGT GGAGAATACA CGCTGGGTGC GTACCGAGAG CAGCGGTATC
CTGCGCACGA CGGTGCAGCT CGGCCAGCGG GTGCGCCGCG GCGAGCAGCT GGGGCTGATC
TCCGATCCCT TTGGCGACGG CGAGACCCAG GCCCTGGCGG CCTTCGACGG CATCGTCATC
GGCCGCACCA ATCTGCCCCT GGTCCACGAG GGCGACGCGC TGTTCCACGT CGCCCGGGTG
CGCCACCCGG AGCGCGCCTC GGAGGTGGTC GAGGAGCTGG CGGAGCTGGA CGGCGAGGAG
GATGAGCCGT CGTGA
|
|---|
| Protein sequence | MARRRRSAFV ISDQAVPPGE RRTVQLDVAQ LYTHTPVGMP VHVVHGRRDG PTLCLSAAIH
GDEINGIEII RRVLALPQLR RMRGTLLAVP IVNVFGVLAQ TRYLPDRRDL NRSFPGSAGG
SLAARLAHLF MSQVLERASH AIDLHTGTAH RTNLPQIRAN LDDPGTLELA RAFSAPVIIN
SDLRDGSLRH AADERGIPVL LYEAGEALRF DEDCIRLGVR GITGVMRELG MLPRVKRKYP
PRRPVQVENT RWVRTESSGI LRTTVQLGQR VRRGEQLGLI SDPFGDGETQ ALAAFDGIVI
GRTNLPLVHE GDALFHVARV RHPERASEVV EELAELDGEE DEPS
|
|---|
| |