| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0239 |
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| Symbol | |
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| ID | 4711451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 275384 |
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| End bp | 276217 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639854699 |
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| Product | ABC transporter |
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| Protein accession | YP_001001835 |
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| Protein GI | 121997048 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0121647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAGC ACGCCGAGAC CCTCTCCGAG CCACGCGCGC CGCGGGCCGA GAACGAACGC
TGGCTGCCGC GGCCGAGCCT GCGCTTCATC CCCGTCTGGC AGCGCAACCT GCGCGTCTGG
CGCCGGCTGA TCTGGCCCTC GCTGCTCGGC CACTTCGGTG AGCCGGTGCT CTACCTGCTG
GCCTTCGGCT ACGGCCTCGG GGCGCTGATC GGCGAGCTCG ATTCGGGGAT GCCGTACAGC
GTCTTCATCG CCTCGGGGAT CGTCTGCTCC AGCGCCATGT TCACCTCCAG CTTCGAGGCG
CTCTACTCGG CGTACACGCG CATGGAGACC CAGCAGACCT GGGCGGCGAT GCTCGGCGCG
CCGCTGTCGG TGGACGACAT TGTCCTCGGT GAGGCGGTGT GGGCGGCCAG CAAGTCGCTG
CTCAGCGCCG GCGCCATCGG CATCGTCGCC GTGGCCCTGG GCATCCTCAG CCTGCCCGGT
ATGCTCCTGG CGCTGCCGGT GGTCTTCCTG GCCGGGCTGG CCTTCGCCAG CATGGCGCTG
ATCATCACCG CGCTGTCGCC GAGCTACGAC TTCTTCCTCT ACTACTTCAC CCTGGTGCTG
ACCCCGATGC TGCTGCTCTC CGGGGTCTTC TTCCCCATCG AGCAGCTGCC GGCGGTGATC
GCCGGGCTGG CCTACCTGCT GCCGCTGGCG CACATGGTCG AGGTGGTCCG GCCGCTGGCG
GTGGGCGAGG GCATCGGGCC GGGGGCGCTG CTGCACCTGC TGGTGCCGCT GGTCTACATT
GTTGGCGCCT TCTCGGTGGC GGCCTACCTC TTCCGGCGGC GTCTGATCCG CTGA
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| Protein sequence | MPEHAETLSE PRAPRAENER WLPRPSLRFI PVWQRNLRVW RRLIWPSLLG HFGEPVLYLL
AFGYGLGALI GELDSGMPYS VFIASGIVCS SAMFTSSFEA LYSAYTRMET QQTWAAMLGA
PLSVDDIVLG EAVWAASKSL LSAGAIGIVA VALGILSLPG MLLALPVVFL AGLAFASMAL
IITALSPSYD FFLYYFTLVL TPMLLLSGVF FPIEQLPAVI AGLAYLLPLA HMVEVVRPLA
VGEGIGPGAL LHLLVPLVYI VGAFSVAAYL FRRRLIR
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