Gene Hhal_0238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0238 
Symbol 
ID4711450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp274064 
End bp275353 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content79% 
IMG OID639854698 
Producthypothetical protein 
Protein accessionYP_001001834 
Protein GI121997047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00701852 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTCACCC ACGCCCGACA ACCGCCCATG TCCCACTGGC GAACGCTCTC CGGACTCTTC 
GGCCCGCGCT GGCGTCACCC GGACCCGGCC ACCCGCCGGC GGGCCGCCAT GGATCTCGAC
CCCGACGACC CGGAGACCGC CGAGGCGCTG GCCGCCCTGA TCGACGACCC GGCCCCGCCG
GTGCGCGAGG CCGCCGCCAA GCGCTGCCGA GACCTGGCCA CCCTGCGCCG GCTGCGCCGC
CACGACCCGG ACGCCAGCGT GCGCACCGCC GCCACGGTCC GCTACCGCCA GCGGCTGGTG
GGCGACGTAC CGCCGGAGGC GGTAGCCACT GAACTGCGCC ACTGCGACGA CCCCACCGTG
GCCGCCCATA TCGCCCAGCA GGGCCGCACC CCGGCGGTGC GCCGCGCCGC CCTGGAGCAT
CTGGACCAGG CCCCGGTCCT GCAGGAGGTG GCCCTCCACG ACGACGACCC GGCCACCCGG
CTGTACGCCG TGCAGCAGCT CTCCGACCCA CAGACCCTGC GGCGCCTGGC CGAGCGTGCC
CGCAGCCTGG CCCCGGACGT GGCCGACGCC GCCGAGCATC GCCTGCACGC CCCGGCGCCG
ACCACTCCCG AGGCCGACCC CGAGACCGAC ACCACCGCTG AACCGGAGCC GGCGGCCGAT
CCCGCGCCCC CCTGCGAGGA CGAGGCGGCC GCCCCATCCA CCGGCGCCGC TGCCTCGCTG
GCCAACGCCA TGACCGGCCT CGCCGAGGGC GGCTGGTGGC CCGGCTACCA CGCCCGCCGG
CGGGCGCTGA TGGCGCGCTG GCGGGAGCTG GAGGAACCAC GCCCCCCGGC GCTGAGCGAG
CGCTTCCGCC AGGCCACCCT GGCGGCCCTG ATGCAGCAGC CGCGCAACCA CGGCGGCGAG
GCCACCCGCA CCCGCCTGCA GCTGGAGAAC CTGCTCGCCG AGACCCGGGG GGAGGACGAT
CCGGCCAGCG CCGTGGGGCA GCGCCTGGAG GCCCTCAGCC GCAGTGTTGC CGAGCTGACC
GGCGACCACC CCGATGAGGC CCGCGCCCGC ATCCACCTGC AGCGCCTGGC CCGTCGGGTG
CCGCAGATCC GCCCGCGGCG CCCGGTCCGC GCCGGGGTGC GCCCGCCGCA TCGCCCTTCG
GCGCCGCACG ACCTCCCCGC CCTGGCCCGG AGCCTGGCCG ACGCCGAGGC GGCCATCGCC
GCCGGCGACC TGCACCGGGT CCGCGCGGCC CTCGGCGAGG CCCGGCGGCT GGTGGAACCC
GCCGAGGCCG GCGAGCCGCC GCAGGGCTAG
 
Protein sequence
MLTHARQPPM SHWRTLSGLF GPRWRHPDPA TRRRAAMDLD PDDPETAEAL AALIDDPAPP 
VREAAAKRCR DLATLRRLRR HDPDASVRTA ATVRYRQRLV GDVPPEAVAT ELRHCDDPTV
AAHIAQQGRT PAVRRAALEH LDQAPVLQEV ALHDDDPATR LYAVQQLSDP QTLRRLAERA
RSLAPDVADA AEHRLHAPAP TTPEADPETD TTAEPEPAAD PAPPCEDEAA APSTGAAASL
ANAMTGLAEG GWWPGYHARR RALMARWREL EEPRPPALSE RFRQATLAAL MQQPRNHGGE
ATRTRLQLEN LLAETRGEDD PASAVGQRLE ALSRSVAELT GDHPDEARAR IHLQRLARRV
PQIRPRRPVR AGVRPPHRPS APHDLPALAR SLADAEAAIA AGDLHRVRAA LGEARRLVEP
AEAGEPPQG