Gene Hhal_0232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0232 
Symbol 
ID4711430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp265377 
End bp267041 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content74% 
IMG OID639854691 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001001828 
Protein GI121997041 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTACC AAGCCCTTGC GCGCAAGTGG CGGCCCCGCC GCTTCGAAGA CGTGGCCGGC 
CAGGAGCACG TCCTGCGCGC GCTGGCCAAC GCCCTGGCCG ACGGCCGTCT GCACCACGCC
TACCTGTTCA GCGGCACCCG CGGGGTCGGC AAGACGACCG TGGCGCGCAT CCTCGCCAAG
TGCCTCAACT GCGAGCACGG CATCACCGCC GAACCGTGCG GTACCTGCGA CAGCTGCCGC
GAGCTGGACG CCGGGCGCTT CGTTGATCTG ATCGAGGTCG ACGCCGCCTC GCGCACCAAG
GTGGAGGACA CCCGCGAGCT GCTGGATAAC GTCCAGTACG CCCCGACCCG CGGGCGGTTC
AAGATCTACC TCATCGACGA GGTCCACATG CTCTCCAGCC ACAGCTTCAA CGCGCTGTTG
AAGACGCTGG AGGAGCCGCC GGACCACGTG AAGTTCCTGC TGGCCACCAC GGACCCGCAG
AAGCTGCCGG TGACGGTGCT CTCACGCTGC CTGCAGTTCC ACCTGCGCCG GCTCTCCAGC
ACCCTGATCC GCGATCGGCT GCTGGCTCTG GCCGAGGAGG AGGGGGTGAC GGTGGACGCC
GGCGCCGCGG CGCGGCTGGC CCGGGCCGCC GACGGCAGCC TGCGCGACGC CCTGAGCCTG
CTCGATCAGG CCCTCGCCTT CGGTGAGGGG GCGGCCCGGG ACGACGAGGT GGCGGCGATG
CTCGGCGCCA TCGAGCGCCG CCACGTGCTG GAGGTGCTCA CCGCCCTGGC CGACGGCGAC
GGCGCGGCGC TGGTGACGGC GGCGCGGCAC ATGGCCGAGG TGGCGGCGGA TTTTGACGAG
GCGCTGGCCG AGCTGGTGGC CACCGTCCAC AGCCTGGCCC TGGCGCAGCA GGTGCCGTCG
GCCATCGGCG ACGACGAGCC CGAGCGCGAT CGGCTGCTGG CCCTGGCCGA GCGCATCGAT
GCCGAGGATC TGCAGCTCTA CTACCAGATC GGCGTCAACG CCCGCCGCGA TCTGCCCTAC
GCACCGGATC CGGCCACCGG CTTCGAGATG GCCCTGCTGC GCATGCACGC CTTCCGCCCG
GCGGAGGGCG CGCCCCGGGT GGCGGCGCCG ACGGACGGCG GCCGCTCGGG GACGGATGGC
GGCGCCCCGG TGGCCGGCGG GGGCGGTGCC CAGGCCGGTG GCGGGCCCGC GGCGAACGCC
TCGGCCGGCG TGGCGCCCCC CGAGCCGGCC GCGCCACCCC CGGGCGAGGC CGTGGGTGCG
GAGGGCGCGA CCGATGAGGA CGCGGTGGCC CGCTGGACGC AGATCGTCGG TGGGCTGAGT
GGCCCGCTGC GCATGATCGC CGCCCACTGC GAGTGGGTCG GCCGCGAGGG GGCGCGTGTT
ATCCTGCGCC TGGACGAGAG TCACGAATAC CTGAACAACG CCGAGCGGCG TGAGCGGCTG
CAGACGGCCC TCGGCGAGGC CTTCGGTGAG ACGATCACCC TGCAGATCGA CATCGGCCCC
ACCCGGTGGA CGCCGGCGAT GGCCGAGCGG CAGCAGGCGC AGGAGCGTCA GGCCGAAGCC
GAACAGGCCC TGGCCGGGGA CCCGGCGTTG CAGGGGCTGT GCGAGGCCTT CGACGGCCAG
CTCCACGGCG TGCGGCCGGC GGACGGCGAA GGCAACCATC CGTAG
 
Protein sequence
MTYQALARKW RPRRFEDVAG QEHVLRALAN ALADGRLHHA YLFSGTRGVG KTTVARILAK 
CLNCEHGITA EPCGTCDSCR ELDAGRFVDL IEVDAASRTK VEDTRELLDN VQYAPTRGRF
KIYLIDEVHM LSSHSFNALL KTLEEPPDHV KFLLATTDPQ KLPVTVLSRC LQFHLRRLSS
TLIRDRLLAL AEEEGVTVDA GAAARLARAA DGSLRDALSL LDQALAFGEG AARDDEVAAM
LGAIERRHVL EVLTALADGD GAALVTAARH MAEVAADFDE ALAELVATVH SLALAQQVPS
AIGDDEPERD RLLALAERID AEDLQLYYQI GVNARRDLPY APDPATGFEM ALLRMHAFRP
AEGAPRVAAP TDGGRSGTDG GAPVAGGGGA QAGGGPAANA SAGVAPPEPA APPPGEAVGA
EGATDEDAVA RWTQIVGGLS GPLRMIAAHC EWVGREGARV ILRLDESHEY LNNAERRERL
QTALGEAFGE TITLQIDIGP TRWTPAMAER QQAQERQAEA EQALAGDPAL QGLCEAFDGQ
LHGVRPADGE GNHP