Gene Hhal_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0230 
SymbolrecR 
ID4711424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp264413 
End bp265018 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content74% 
IMG OID639854689 
Productrecombination protein RecR 
Protein accessionYP_001001826 
Protein GI121997039 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.601647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTCT ACTCGCCGCG GCTGCGCGAG CTGGTTGAGG GGCTGCGCCG GCTGCCCGGG 
GTGGGCGCCA AGACGGCGCA GCGCATGGCG CTGCACCTGC TCCAGCGCGA CCGGGACGGC
GCCCGGCAGC TGGCCGACGC CCTGCAGCGG GCGGTGGACG GGGTGGGGCA CTGCCCCGAG
TGCGGCCTGC TCACGGAGGA AGAGCGCTGC GGGCTGTGCG CCAGTCCGCA GCGCCGCCGG
ACGCTGCTGT GCGTGGTGGA GAGCAGCGCC GACGTCTTCG CCCTCGAGCA GGCCACGGAC
TTCCAGGGGC TGTACTTCGT CCTCGGCGGG GCGCTGTCGC CCCTGGACGG CATCGGCCCG
GAGGAGCTGG GGCTGGACCG GCTGCAGCAG CGGTTGGAGG CCGGTGAGGT CGAGGAGATC
ATCCTCGCTA CCAACCCCAC CATTGAGGGC GAGGCCACCG CCCACTACGT CCAGAGCCTG
GCCGCCGAGC GCGGGGTGCG CACCACGCGG ATCGCCCACG GGGTGCCGAT GGGCGGCGCC
CTCGAGCAGG TGGACCAGGG CACCCTCTCC CACGCCTTCA TGGGGCGGCG GGACTACGAG
GGCTGA
 
Protein sequence
MSVYSPRLRE LVEGLRRLPG VGAKTAQRMA LHLLQRDRDG ARQLADALQR AVDGVGHCPE 
CGLLTEEERC GLCASPQRRR TLLCVVESSA DVFALEQATD FQGLYFVLGG ALSPLDGIGP
EELGLDRLQQ RLEAGEVEEI ILATNPTIEG EATAHYVQSL AAERGVRTTR IAHGVPMGGA
LEQVDQGTLS HAFMGRRDYE G