Gene Hhal_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0229 
Symbol 
ID4711089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp264043 
End bp264387 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content67% 
IMG OID639854688 
Producthistidine triad (HIT) protein 
Protein accessionYP_001001825 
Protein GI121997038 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.280449 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACT GTATCTTCTG CAAGATCGTC GCCGGCGAAC TGCCGTCGGA GATCGTCCAC 
AGCGGCGAGC AGGTGATCGC CTTCCGCGAT CTCCACCCCC AGGCGCCGAC CCATATCCTG
ATCATCCCGC GGCGCCACGT GCCCACGCTG CACGACCTGA CCGCCGCCGA CGGCGAGCTG
CTCAACGAGA TGTTCACCGT GGCGCGCACC CTGGCCGAGC AGGAGGGCCT GGGCGAGCGC
GGCTATCGCA CGGTCTTTAA TTGTAAGGAC GAGGGCGGGC AGGAGGTCCA CCACTTGCAC
CTCCACCTGA TCGGTGGTCG GCAGATGACC TGGCCGCCGG GCTGA
 
Protein sequence
MTDCIFCKIV AGELPSEIVH SGEQVIAFRD LHPQAPTHIL IIPRRHVPTL HDLTAADGEL 
LNEMFTVART LAEQEGLGER GYRTVFNCKD EGGQEVHHLH LHLIGGRQMT WPPG