| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0221 |
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| Symbol | |
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| ID | 4711037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 255194 |
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| End bp | 256699 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639854680 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001001817 |
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| Protein GI | 121997030 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.120176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA CCCGCGCCCC CTACCGCGGC GAAGACCTGC GATTCGACTA CGACCGGGAC
GCCTTTCTGC GCAGGCTGCA GCGCCTGCTC CCCCGGGCCG ATCAGGTCAT CGACGACCCC
GAGGGCCTAC GCCCCTACGA GTGCGACGGG CTGGCTGCCT ACCGACAGCT GCCGGTGGCC
GTGGCCATCC CCGAGACGAT CGAACAGGCC CAGGCGGTGC TCGCCCTGTG CCACGAGTAC
CGCGTGCCGG TCACCGCCCG CGGCGCCGGG ACCTCGCTCT CCGCCGGTGC ACTGCCCCAC
CCCCAGGGCA TCGTGCTCAG CCTGGCGCGC TTCAACCGCA TCCTCGAGCT CGACCCGCTG
CGCCGCACCG CCCGCGTCCA GCCCGGTGTC CGCAACCTCG CCGTCAGCGA GGCCGCCCGC
CCCCACGGCC TCTACTACGC CCCCGACCCC TCCTCGCAGA TCGCCTGCTC CATCGGCGGC
AACGTCGCCG AGAACGCCGG CGGCGTGCAC TGCCTCAAGT ACGGCCTGAC GGTGCACAAC
GTGCTCGCCG CCACAGTGCT CACCCCCGAG GGCGAGCGCA TCGACATCGG CAGCAGCGCC
CTCGACGCCC CCGGGTACGA CCTGATGGCC CTCTACACCG GCTCCGAGGG GATGCTCGGC
GTGATCGTCG AGGCCACCGT GCGCCTGCTG CCAGAACCGG TGCACAAAGA GGTCCTGCTC
GCCGCCTTCC CCAGCGTCGA GGCCGGCGGC CACGCCGTGG CCGGGGTCAT CGGCGCCGGC
ATCATCCCGG CCGGTCTGGA GATGATGGAC GGGCCGGCGA TCCGCGCCGC CGAGGACTTC
GTCCACGCCG GCTACCCCAC CGACGCCGCC GCCATCCTCA TCGCCGAGCT CGACGGCGCC
CCCGACGAGG TCACCGAAGA GGTGACACGG CTCAGCGACC TGCTGCGCCA GCACGGCGCC
AGCGAGGTCC GCGTGGCCGC CGATGCCGCG GAGCAGGCCC GCTTCTGGGC CGGCCGCAAG
GCGGCCTTCC CGGCCGTGGG GCGGATCTCG CCGGACTACT ACTGCATGGA CGGCACCATC
CCGCGCCACC AGCTCGCCAA CGTGCTCACC GGCATCGACC GTCTCTCCCG GGAGTACGGG
CTGCGGGTGG TCAACGTCTT CCACGCCGGC GACGGCAACC TCCACCCCCT GGTGCTGTAC
GACGGCAACG TCCCCGGCGA GTTCGAGCGC ACCGAGGAGC TCGGCCGGCG CATCCTCGAG
CTGTGCGTGG ACGCCGGCGG CACCGTCACC GGTGAGCACG GCGTCGGCCT GGAGAAGATC
GACGCCATGT GCCATCAGTT CCGCCCGGCG GAGCTCGAGC AGTTCCACGC CGTCAAGGCC
GCCTTCGACG AGGCCGGCTG CCTGAACCCG GGCAAGGCGG TCCCCACCCT GCACCGCTGC
GCCGAGTTCG GCGCCCTCCA CGTCCACCAC GGGCAGCTGC CCCACCCGGA GCTGGAGCGC
TTCTGA
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| Protein sequence | MTDTRAPYRG EDLRFDYDRD AFLRRLQRLL PRADQVIDDP EGLRPYECDG LAAYRQLPVA
VAIPETIEQA QAVLALCHEY RVPVTARGAG TSLSAGALPH PQGIVLSLAR FNRILELDPL
RRTARVQPGV RNLAVSEAAR PHGLYYAPDP SSQIACSIGG NVAENAGGVH CLKYGLTVHN
VLAATVLTPE GERIDIGSSA LDAPGYDLMA LYTGSEGMLG VIVEATVRLL PEPVHKEVLL
AAFPSVEAGG HAVAGVIGAG IIPAGLEMMD GPAIRAAEDF VHAGYPTDAA AILIAELDGA
PDEVTEEVTR LSDLLRQHGA SEVRVAADAA EQARFWAGRK AAFPAVGRIS PDYYCMDGTI
PRHQLANVLT GIDRLSREYG LRVVNVFHAG DGNLHPLVLY DGNVPGEFER TEELGRRILE
LCVDAGGTVT GEHGVGLEKI DAMCHQFRPA ELEQFHAVKA AFDEAGCLNP GKAVPTLHRC
AEFGALHVHH GQLPHPELER F
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