Gene Hhal_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0219 
Symbol 
ID4710993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp251767 
End bp252588 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID639854678 
Producthypothetical protein 
Protein accessionYP_001001815 
Protein GI121997028 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACG TGCGCAGGGT TTTCTTTGTC TCCGATCGTA CCGGGATCAC GGCCGAGGCC 
CTCGGCCACT CGCTGATGAC CCAGTTCTCG GTCACCACCG AACAGGCCAC GATCCCCTTT
GTCGACACGG CGGAACGGGC ACGGGCGGCG CTGCGCCGGA TCACGGCGGC CTCCGCCGAG
GATGACCATC CGCCCATTGT CTTCTCCACC ATCATCGACC CGGAGGTGCT CGCCGTCCTG
CGCGAGAGCG AGCACATCGT CCTCTTTGAT TTCTTTGACA CTTTTATCGC GCCCCTGGAG
CGCGAACTCG AGGTGCCGTC GAATCACGTC ATCGGCCGGT CGCACGGAAT CGCGGATGAT
AGCACGTACG ATGTGCGGAT CGATGCCATG AATTTCGCAC TGCACCATGA CGACGGCGCC
ACTCACCAGC ACTACGGGCG GGCGGATGTC ATCCTGGTGG GGGTCTCGCG CAGCGGGAAG
ACCCCGGCCT CGCTCTATCT GGCGCTGCAG TTCGGCGTCT ACGCCGCCAA CTACCCACTC
ACCGACGACG ACCTGATCGC CACCCGGTTG CCCCGGGCGC TGGTCTCCCA CCGGGCGAAG
CTCTTCGGGC TGACCATCGA TCCGGATCGC CTGCACCAGA TCCGCAGCGA GCGCCGCCCC
AACAGCCGCT ACGCCGAGTT GCGCCAGTGC GAGTACGAGG TGGCGCGGGC CGAGGCAATG
TTCCGCCGCG AGGGCATTCC GTACCTGGAC ATCACCACCA TGTCCATCGA GGAGATCTCC
TCGACGGTGA TCCATCAGCA CGCCCTGACC CGGCGCGTCT AG
 
Protein sequence
MTDVRRVFFV SDRTGITAEA LGHSLMTQFS VTTEQATIPF VDTAERARAA LRRITAASAE 
DDHPPIVFST IIDPEVLAVL RESEHIVLFD FFDTFIAPLE RELEVPSNHV IGRSHGIADD
STYDVRIDAM NFALHHDDGA THQHYGRADV ILVGVSRSGK TPASLYLALQ FGVYAANYPL
TDDDLIATRL PRALVSHRAK LFGLTIDPDR LHQIRSERRP NSRYAELRQC EYEVARAEAM
FRREGIPYLD ITTMSIEEIS STVIHQHALT RRV