Gene Hhal_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0203 
Symbol 
ID4709323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp234618 
End bp235046 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content71% 
IMG OID639854662 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_001001799 
Protein GI121997012 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.530407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGTCCA ACACGCTCCT GGAGCTGGAG CTGAACGCCG AGCTGCGTCG GGTCGCCGAG 
GCGTGCCGGG CGTGGGAGCG GCTGGCCCAG CAGATCGGCC TGGGCGAGGA GGCCGCCGGG
GCGGTGGAGT TGGCCCTGTG CGAGGCGATC AACAACGCCA TCATCCACGC CTGCGGCAAC
TGCCCGAGCC GTGTGGTCCG CGTGACGGTC CACCAGCGGG CCGACTGGCT GGTGCTGCAG
GTGCACGACC AAGGGTGGCC GATGACCACC GAGCCGGCTT CGGTGGACGT GCGAAGCGGC
GCGGACTGCG CCGAAGGGGG GCGGGGGATC GGCATCATCC GCGGGCTGAT GTGGCACGTT
CGCTATCGAT CCGGCCCGGC CGGAAACACC CTGGAGATGC AGTACCCCCT CCCGGGGGAT
CAACGGTGA
 
Protein sequence
MQSNTLLELE LNAELRRVAE ACRAWERLAQ QIGLGEEAAG AVELALCEAI NNAIIHACGN 
CPSRVVRVTV HQRADWLVLQ VHDQGWPMTT EPASVDVRSG ADCAEGGRGI GIIRGLMWHV
RYRSGPAGNT LEMQYPLPGD QR