Gene Hhal_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0201 
Symbol 
ID4710963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp232912 
End bp233673 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID639854659 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001001797 
Protein GI121997010 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.957931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGGC GGCGCGTCTG GTCCAGCTGG CCGCCGTGGG CTGGACTGCT CGGTGTCGTC 
GCCCTATGGA TGGCCGCCGC CCACCAGGTT CCGGACTCCA TCCTGCCGGA CCCCTGGGTG
GTCACCCTGG AACTGGGTGG CACCCTCCAC TCCGGCGACC ACTGGGCGAA CACCGGGGTC
ACCCTGCGCA ATGTTGTGGT CAGCTTCTTG CTCTCGCTGC TTGGCGGCGT CGCATTGGGG
CTCTGGGCGG CACGCTCACC TACCCTGCAA AGGGCCCTGC ACCCGATCAT CGTCCTGATC
GAGGCAGCCC CTCACATCGC CTGGCTGGTC CTCGCCGTCC TCTGGCTGGG CATCGGGGTC
GGTCCGCCAG TGCTGGTGGG TGTCAGTATG GCCCTGCCGC TGATCTACAT GGCCACCAGC
CACGGGATCG CGCAGATCGA TCGGGGCATC ATGGACATGG CCCACATCTA TCAGCTCGGC
TGGTACAAGC GCCTGACCCA CATCCTGCTC CCGCACCTGG CGCTGACCCT CGCCGGAGCC
GCGTCGGGGG CGTTATCGGT CAGCTGGCGT GCCGTGATCA TGGCCGAGGC CTTCGCCAGC
GATGCGGGTC TGGGGCAGTC CCTCTGGGGC AGCTACCTCT ACGGCGAGGT CACAGCCGTG
TACGCCCAAG TCCTGTGGAT TGTGCTCCTC GGCCTAGCGC TGGAGTACCT GCTGATCCAC
CCCGGTCGAC AACTCATCGA GCGACGCCTT CAACATGTCT GA
 
Protein sequence
MSRRRVWSSW PPWAGLLGVV ALWMAAAHQV PDSILPDPWV VTLELGGTLH SGDHWANTGV 
TLRNVVVSFL LSLLGGVALG LWAARSPTLQ RALHPIIVLI EAAPHIAWLV LAVLWLGIGV
GPPVLVGVSM ALPLIYMATS HGIAQIDRGI MDMAHIYQLG WYKRLTHILL PHLALTLAGA
ASGALSVSWR AVIMAEAFAS DAGLGQSLWG SYLYGEVTAV YAQVLWIVLL GLALEYLLIH
PGRQLIERRL QHV