| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0197 |
|---|
| Symbol | |
|---|
| ID | 4710961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 229587 |
|---|
| End bp | 230675 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639854655 |
|---|
| Product | bile acid:sodium symporter |
|---|
| Protein accession | YP_001001793 |
|---|
| Protein GI | 121997006 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0279028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCCA TCCTCTACGC CCTTCAGAAG CGACTGACCT GGGCCATACC GGCCATGCTC
GCGCTGGGTT TCCTCTACGG CGCTCTCCTG CCGGAAGAGC CGCTGCGCTG GCTGATCCTG
CCGCTGACGT TCCTGATGGT CTACCCGATG ATGGTCACCC TGCGCGTATC CCACCTGACC
GGGTGGGATG ACCTGCGCGC GCAGCTTCTG ACCCAGGGCG TCAACTTTGC AGTCATCCCC
TTCATCGCTT TCGGTCTGGG GCTGCTGTTC TTCGCGGATC AGCCCTATAT GGCGCTCGGG
CTCCTGCTGG CCGGCCTGGT GCCGACCAGC GGCATGACCA TCTCCTGGAC GGGCTTCGCG
GGCGGCAACC TCGCCGCAGC GGTGAAGATG ACGGTCCTCG GCCTGCTGAT CGGGGCGCTG
GCGACCCCCT TCTATGTCGA GGCCCTTCTG GGCGCCCAGA TCGACGTGGA CTTCTGGGCC
ATCGCCCAAC AGGTGCTCGT GATCGTTGTC CTGCCCCTTG TCCTCGGCCT ACTCACCCAG
CGCGCACTGG TGCGCCGCTT CGGTCAGGAA GACTTCCGCA ATCGCTGGGC GTTTCGCTTC
CCGGCACTCT CCACACTGGG CGTGCTGGGC ATCGTCTTCA TCGCCATGGC CCTCAACGCG
GAGACGATCC TCGCGGCGCC CGAGCAATTG CTCTACATCC TGATTCCCGT CGCCCTGCTC
TACGCCATCA ACTTCCCGCT CAGCACGGCG CTGGGCAAGG CACTCCTGCC CCGCGGTGAC
GCCATCGCCC TGGTCTACGG CACGGTGATG CGCAACCTCT CCATTGCCCT GGCGATCGCC
ATGAACGCAT TCGGTGCCGA GGGCGCCAAC GCCGCTCTGG TGGTGGCCAT CGCCTTCGTC
ATCCAGGTCC AGGCCGCCGC CTGGTACGTG CGGGTCACCC GGCGTGTCTT TGGCCCGCCC
GACGACGAGG TGCGCGAGGC CCGTCGGTCG GATACGGCCG AGTCTGCCGA CAACGGCGGC
GCTCAGGGGA GCGTCGGGTC GGAAACCGGA GCAGAGAGCG AGTCGGGCTC CCGGCGGCCC
TCGGGCTGA
|
|---|
| Protein sequence | MWSILYALQK RLTWAIPAML ALGFLYGALL PEEPLRWLIL PLTFLMVYPM MVTLRVSHLT
GWDDLRAQLL TQGVNFAVIP FIAFGLGLLF FADQPYMALG LLLAGLVPTS GMTISWTGFA
GGNLAAAVKM TVLGLLIGAL ATPFYVEALL GAQIDVDFWA IAQQVLVIVV LPLVLGLLTQ
RALVRRFGQE DFRNRWAFRF PALSTLGVLG IVFIAMALNA ETILAAPEQL LYILIPVALL
YAINFPLSTA LGKALLPRGD AIALVYGTVM RNLSIALAIA MNAFGAEGAN AALVVAIAFV
IQVQAAAWYV RVTRRVFGPP DDEVREARRS DTAESADNGG AQGSVGSETG AESESGSRRP
SG
|
|---|
| |