| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0192 |
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| Symbol | |
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| ID | 4710940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 225912 |
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| End bp | 227201 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639854650 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001001788 |
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| Protein GI | 121997001 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.11093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTCGCC CTTCGGATCA ATGGTTCGAT TACCGCCTCG AAAGCGCCTT CCAGCCGATC
CTCAGCCTCA GCCACCGCCG CATTGTCGGC TACGAGGCCC TGCTACGCGG CAGATGCTCG
ACCACCGGGG CGCTGCTCCC TCCTGCCCGG GTCTTTGAGG CGGCCAACAC ACTCGAGCAT
CTGCACCAGC TCGAGCAACA GAGCCAGGCT GTGCATATCG CCAACTTCCA ACGGTGCGGC
GACCCCGAAG CGCCGCCGAA GTGGCTGTTC CTGAACGTCA GCCCGGAGAC CGTCGCCGAC
AACGCCTATC GTGACCTACT GCCGGAGGCA CTCCGCTTCG GGGGGGTGCG GCAGCACCAG
ATCGTCGTGG AGTTGCTCGA AACCCCCGGC AACGAGACCA CCCTGGCCGA GGCGGTGGAT
TACTTCCGGG GCCTGGGCTG CCTGGTCGCC CTCGACGACT TCGGCACCGG CTACTCGAAT
TTTGAACGCC TGTGGGCGCT TGAGCCCGAT CTGGTCAAAC TGGATCGCTC ACTGATCCAG
GGCGCCGCAG AGGCGCTCAA CAGCAAACGC CGCATCCTCA GCAACCTGGT TGCCTTGATC
CACGAGGCCG GGAGTCTGGT GGTCCTCGAG GGGGTCGAGA GCGAAGAGCA AGCGATGATC
GCCCTGGATG CCGATATCGA CCTGGTCCAG GGATTTTACT TCGCGCTGCC GACTCTGGAC
TCCCATGCTC CGGCGGAGCG CGGCCTGGCG CAGGTGCATC AGGTGACCGA ACGCTTCACC
GAGGAGACCC TTACCGCAGT CAACCGGGAG CAAATCACCC TGCAACCGTA CGAGCAGACC
TTCCTGCGGG CGGCAACCCG GCTGGACCGG GGCCATGGTC TGCGCGAGAG TTGTGCCGAT
CTCATGGCCC TGCGGGGCGT TCAGCGCTGC TTCGTCCTCA ATCAACGCGG TGAACAAGTC
GGGGAACACC TGCTGCCCGC CGGGCTGAAA GCCGATGCCC CGGTGACGAC CGACCCCCGC
CACGCTCCGC TCGTGGACAC CCGTGGCGGC ACTTGGTCGA GGCGACCGTA CTTCCGCGAT
GCCCTGCTCG CCCCCCGGCG GCTGAAGATC TCTCGCCCCT ACTTGTCCAG CACGGGCCGA
CACGTCTGCA TCACCCTCTC GATCGCCACG CGCTCCCACG ACGACGGCCA TTACTACGTG
CTCTGCTGCG ACGTCGCATG GTACCCGGGC GGCGCCCCCG AAAAAGCGCC TTGCGAAGGA
ACCTCCCGGG CCGCAGCGCC GAGTCCGTGA
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| Protein sequence | MPRPSDQWFD YRLESAFQPI LSLSHRRIVG YEALLRGRCS TTGALLPPAR VFEAANTLEH
LHQLEQQSQA VHIANFQRCG DPEAPPKWLF LNVSPETVAD NAYRDLLPEA LRFGGVRQHQ
IVVELLETPG NETTLAEAVD YFRGLGCLVA LDDFGTGYSN FERLWALEPD LVKLDRSLIQ
GAAEALNSKR RILSNLVALI HEAGSLVVLE GVESEEQAMI ALDADIDLVQ GFYFALPTLD
SHAPAERGLA QVHQVTERFT EETLTAVNRE QITLQPYEQT FLRAATRLDR GHGLRESCAD
LMALRGVQRC FVLNQRGEQV GEHLLPAGLK ADAPVTTDPR HAPLVDTRGG TWSRRPYFRD
ALLAPRRLKI SRPYLSSTGR HVCITLSIAT RSHDDGHYYV LCCDVAWYPG GAPEKAPCEG
TSRAAAPSP
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