Gene Hhal_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0188 
Symbol 
ID4710924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp220661 
End bp221539 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content71% 
IMG OID639854646 
Productputative methyltransferase 
Protein accessionYP_001001784 
Protein GI121996997 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3315] O-Methyltransferase involved in polyketide biosynthesis 
TIGRFAM ID[TIGR00027] methyltransferase, putative, TIGR00027 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAC GCCCCCGCAG CCAGACCGCC GAGATCGCTG CCGCACTCCG TGTCTGGCAC 
ACCCGTCTCG ACGACGCCCC GACGATCTTC GACGACCGGG CCGTACTCCC CCTCCTGAGC
CCGCGGATGC GCCAGCTGGT GCAACCACCG CCCCCACTGC TGGCCATGCA GCTACGCACC
ATGGAGGGCA TGCACCCGGA ACTCGCCGCC CTGCGCGGTC AGACGGTCAC CCGCGCCCGC
TTCGCCGAGG ACGCCCTGGA CGCCGCCGTG GACCGGGGCC ACCGCCAGAT CGTGCTGCTC
GGGGCGGGGC TGGACACCAC CGCCCTCCGC CGCCCGGACC TCCTCGCCCG GACCACCCTG
CTGGAGGTGG ATCAGGCCCC CATGCAGTGG TGGAAGCGGG CCCATCTGCC CGCCAAGGTG
GCCAACCGGA TGCGATTCGT GGCGGTGGAC TTCGCCCGCG ACCGACTGGC CGAGCGCCTC
CTGGACGCTC GAATCGATCC GCAGACTCCG CTGTTCGCCA ACTGGATGGG CTGCACCTAC
TACCTGCCCC CGGAGGCCAT CGGTGCCACG CTGCAAGGCC TGGCGGAGGT CGCGGCCCCG
GGCAGCGAGC TGGTCGCCGA TTACTGGCTG CCCGCCGGGG AGCTGTCGTG GCGGCCGCGT
ATGCTGTTGC GGGGGGTCGA GCTGGCCCTG AATACGCAGC AGGAGCCACT GCTCGGTCTG
ATACGGCCCG ATACCCTGCA CCGGCTGGCG GCGAACACCG GCTGGCAAGT ACTCGAGGAA
CTGGACGCGC CCGCCCTCCG GGCACACTGG CTCTCTGAAC GACGCGACTC GCTCTCGGTC
CCCGCCTTCG CCCGCTGCCT GCGCCTGGTG CGCGACTGA
 
Protein sequence
MEQRPRSQTA EIAAALRVWH TRLDDAPTIF DDRAVLPLLS PRMRQLVQPP PPLLAMQLRT 
MEGMHPELAA LRGQTVTRAR FAEDALDAAV DRGHRQIVLL GAGLDTTALR RPDLLARTTL
LEVDQAPMQW WKRAHLPAKV ANRMRFVAVD FARDRLAERL LDARIDPQTP LFANWMGCTY
YLPPEAIGAT LQGLAEVAAP GSELVADYWL PAGELSWRPR MLLRGVELAL NTQQEPLLGL
IRPDTLHRLA ANTGWQVLEE LDAPALRAHW LSERRDSLSV PAFARCLRLV RD