| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0187 |
|---|
| Symbol | |
|---|
| ID | 4711049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | + |
|---|
| Start bp | 218449 |
|---|
| End bp | 220656 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639854645 |
|---|
| Product | flavodoxin/nitric oxide synthase |
|---|
| Protein accession | YP_001001783 |
|---|
| Protein GI | 121996996 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCCC GCCTGAGACG GCTGCTGCTC TGCCTGCACC GCTGGATCAC CCTCGCCCTC
GCCCCCTTGT TTCTGGTGAT CATCCTCAGC GGCGGCCTGC TGGCGCTCGA ACCGGTGGTC
CGGGACCTGG CGGCATCGCC GGGCGCGGAG GAACCGATCC CGCTCGCGGA GCTGCAACGC
TTCCTGGCCG AGGTCGACCC CCAGCAGCGC ACCCGCGCCC TGACCCTGGA GCAGGGTGGG
ACCGCCGTGC TCGAACTCAG TCGTGCCGGG GAGCGCTGGC ACGAGGCGTT CGACCTTGAA
CAGCGCACCT CCCTGGGCGA ACGCGCCTAC GGCGGTGCGT TCTTCCAGAC CGTCCGACAC
CTGCACAAGG ACCTGATGCT CGACCTGGCG GTGGTCGTCG AGGTCGCCAG CTACGCACTG
ATCCTGGTGC TGATCGCTGG CCCCTGGCTG GCCTGGCCCC GGCTGCGCCA CAGCCTGACC
CAGTGGCACA CCTTGATCGG CTGGCTGACC CTGCCCCTGC TCCTGCTCGT CTCGATCACC
GGCGTGCTGA TGGCCCTGGA GCTCGGCACC CCCCGGCTGC CCCCGGTGGA CCGCGACGCC
GGACGCCTGG CCGTAGGCCC GGTCCTGCAA CAACTCGAGG CCACCGAGAC CACCCACGTC
TACCGCATGG AACGCTTCGA GCGCGCTGCC TGGACGGTGG AGGTCGACGG CACCGCAGGC
CACCGGCAGC TGATCGTCAC CGCCGAGGGG ATCACCCCGG TGGACGCCTA CCCCGGCTGG
GTCGCCGAGC TTCACCAGGG CACCTGGGCG GGCCCCTGGT CGGGACTCAT CAACCTGCTG
GCCGCCCTGG CCCTGCTGTT CCTGTTCATC AGCGGTGTCT GGCTCTGGGC ACGCCGCTGG
CTGGGCGGAC GGCGCCGTGG TGACGCCGAT GCGGATCTGC TCATCGCCTA CGCCAGTCAG
ACGGGCACGG CGGCCCAACT GGCTGCGGAG ACAGCGCGCG CGCTGCGCAG CGGCGGCGCC
CGCATCGAAG AGGCCGCCCT GTCCGCCCTG GAGCCGAAGG CACTCGACGG CTATCGCTAC
ACGCTGCTGA TCGTCTCCAC CTGTGGCGAC GGGGACATGC CGGATACCGG ACGCACCTTT
CTGGCGGCCC TGGAAAGCTC GTCGTTGAAC CGCACACGAT TCGCACTGCT CGCCCTCGGC
GACTCTAGTT ACCGGCACTT CTGCGCCGCC GGGGAGAGCC TGCGCACCAG CCTGCGCCGT
GCCGGGGCCG AAGAGGTTCT GCCCATGGCC CGAGCCGATG GCGCCCCGGA GGCCACCTGG
CAGCTCTGGC TCGGCGAGGT GGCGGAACTG GTCGGCGTGC AGCCAGGCCA GACCAAACCG
ATCCCGGCCG ATCAGCCCCT GCAGCTGACC CTGCGCCGGC GCGAACAGCT CAACGACCCG
AACGACCCCA TCACCCAGGA AGTTTGGGGG CTGACGCTGG AGAGCGACAC CCCTCTGACC
TACCGCCCCG GGGACCTCCT GCTGGTGCGC CCCGGCGAGG GTGAGCCGGC ACGCCCCTAC
TCCATCGGTA GCACCCCGCT CGACGCCCCG CACCGGCTCG AACTGACCGT CGCCGTCACC
AGCCGTACCG ATGCACGGGG CAAAAACCGC CCCGGGAAGG CGTCCAGCCT CCTGGCGCAA
CGGCTTCAGC TAGGCGAAAC CATCGCAACG TCCCTGCGCA CCCACCGGCA CATGCACCCA
CCAGACGACC CGCAGCAACC GATCATCCTG ATCGCCGCCG GTTGCGGGAT TGCCCCCTTC
ATCGGCTTCG TGGCCGAGCG CGCCGCCCAG AGCCAACGCG GCCCGGTCTG GCTGATCTTC
GGCAACCGCC GCCGCCACGG TGACTTCTTC CACGCCGAGC GCCTGCAGCG GTGGCAGGCC
CAGGGCGTGC TCACGCGGCT TGACCTGGCG TTCTCCCGAG ACCCGGAGGA CGGCGGCTAC
GTGCAAGACC GGATCGCGGA CGCGCGGGCC ATGCTGGTGG ACTGGATGCT CCACCGCAAC
GCCCGGATCT ACGCCTGTGG ACGACGCAGC ACCATCGGAA CGGCAGTGCC AACCGCACTG
ACCGAGGCCC TGCGCCAGTG CGGTGCTCCG GCCTATCGTG ACCAGGCCGA GGCGGTCGTG
CGAGGCTGGC AAAGCGACGG CCGACTGCGC CTCGACGTGA TCGACTGA
|
|---|
| Protein sequence | MPARLRRLLL CLHRWITLAL APLFLVIILS GGLLALEPVV RDLAASPGAE EPIPLAELQR
FLAEVDPQQR TRALTLEQGG TAVLELSRAG ERWHEAFDLE QRTSLGERAY GGAFFQTVRH
LHKDLMLDLA VVVEVASYAL ILVLIAGPWL AWPRLRHSLT QWHTLIGWLT LPLLLLVSIT
GVLMALELGT PRLPPVDRDA GRLAVGPVLQ QLEATETTHV YRMERFERAA WTVEVDGTAG
HRQLIVTAEG ITPVDAYPGW VAELHQGTWA GPWSGLINLL AALALLFLFI SGVWLWARRW
LGGRRRGDAD ADLLIAYASQ TGTAAQLAAE TARALRSGGA RIEEAALSAL EPKALDGYRY
TLLIVSTCGD GDMPDTGRTF LAALESSSLN RTRFALLALG DSSYRHFCAA GESLRTSLRR
AGAEEVLPMA RADGAPEATW QLWLGEVAEL VGVQPGQTKP IPADQPLQLT LRRREQLNDP
NDPITQEVWG LTLESDTPLT YRPGDLLLVR PGEGEPARPY SIGSTPLDAP HRLELTVAVT
SRTDARGKNR PGKASSLLAQ RLQLGETIAT SLRTHRHMHP PDDPQQPIIL IAAGCGIAPF
IGFVAERAAQ SQRGPVWLIF GNRRRHGDFF HAERLQRWQA QGVLTRLDLA FSRDPEDGGY
VQDRIADARA MLVDWMLHRN ARIYACGRRS TIGTAVPTAL TEALRQCGAP AYRDQAEAVV
RGWQSDGRLR LDVID
|
|---|
| |