| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0181 |
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| Symbol | |
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| ID | 4710877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 211675 |
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| End bp | 213798 |
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| Gene Length | 2124 bp |
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| Protein Length | 707 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854639 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001001777 |
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| Protein GI | 121996990 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCACCC GACACCCGCT CACCTGGCTC ACCGCCGCCC TCACCGCCCT TGTGCCCGCG
CTGGCCCTGG CTGAAGAACC GGAAGAGAAC CCGGCGCGCA GCGTGGCCGA ACTGACCCAG
GGCGCCGCCC AGACCCTTGG AGAGGAGCTG CGCGCGATCG GCGACCTGTT CAAGGGCTTC
GAGGGCGAGG CCCTCGGCCC GCAGCTGTGG ACACTCGCCC AGGAGCTGGC CGACCTGGGC
CTGATCATCG CCGTCACCAT CGGTCTGCTC CTGCTGCTGC GGCCGCTGGC GCGCCCCGTG
TTCAACCGCG CCGAAAGCTG GGCGCAGCGA GGGGACGCCC GCCTGCGCAC GGTCCGTCGC
ACCGTCGGTG TGCTCGGCGC CGCGCTGGCC GACCTGGCGA CCATCTTCCT GGCCTGGATT
GCCGGCTACG CCATCGCCCT GTCCTTCGTT GGCGATGTGG GCGGCATCGA GGCGCGGGAG
TCTCTGTTCC TCAACGCCTT TCTGATGGTC GAGGGCGTCA AGGCTCTGCT GCGCATCCTG
TTCGCGCGCC GCAACCCCCA CCTGCGCCTG ATTGCCACCG ACGATGAGCA TGCCAACTAC
TGGGGCAAAC GGCTGGCCCG GATGGCCGGG CTGATCGGCT ACGGCCTGCT GTTTATCGGC
CCCTTTGCCA CCATGGCCGT GGCTGAAGGC GTCGGGCAGC TGGCGGTGCT CATCGTCATG
GTGCTCGCCT TCGGCTACGC AGTGGTCCTG GCCCTGCGCA ACCGCCACGA CGTGCGGGAG
CGTCTCCAGG CCAGTGCCGC GCAGTCCAAG GTACTGTTCA CCCGCACCAT GCTCTCGTCC
CTGGCCTGGG TCTGGCACTG GGTGGTCATC CTCTATTTCG GTGCCCTGGC CGTGGTGACG
ATCACCCAAC CGGACGCCGC ACTGGCCTTC ATGGGGCAGG CGACCCTACA GACCGCGCTG
GCCATCGGCA TCGGCGTCTT CCTGGCCATC GTCCTGACTC AGGCAACGGC CCGGCGCATC
CGGCTCAGTG AGCGCAACCG ACGCCACTTC CCGCTCCTGG AGCAACGGCT GAACAGCTAC
CTGCCGTTCG TCCTGAAGAT CGTGCGAACC GCCATCATCG TGGTGGTCAT CGCCACCGTA
CTCGATGCCT GGCAGCTGTT CGACTTCTCC GGATGGCTGA CTTCCGAGGG GGGGCTGCAG
ACCCTCGGGG TCATCTTCTC GGTCTCCCTG GTGCTGCTCG CCGCCACGGC GGTGTGGCTC
CTGGCAGCGA GCTTCATCGA GCACCGCCTG AACCCGGACG TGGGCCATGG TACGCCGTCG
GCGCGGGAAC AGACCCTGCT CACCCTGTTC CGCAACGCCA TCGCGATCAT CCTGATCACC
ATGACCACGA TGATTGTCCT CGCCGAGATC GGCATCAACA TCGGCCCGCT GATCGCCGGT
GCCGGTGTCC TCGGCCTGGC CATCGGCTTC GGCGCCCAGA AACTGGTTCA GGACATCATC
ACCGGGGTCT TCATCCAGCT CGAGAACGCC ATCGATGTCG GCGATATCAT CACCGCCGGC
GGCGTCACCG GCACCGTCGA GAAGCTGACC ATCCGCTCGG TGAACATCCG CGACCTGTTC
GGGACCTACC ACTTCATCCC GTTCTCGTCG GTGGACAGCG TCTCGAACTT CACCCGGCAC
TTCGCCTACC ACGTCGGCAG CTACGGCGTG GCCTACCGGG AGGATGTCGA CCAAGTGATT
CCCGAGCTCG AGGCGGCCTA CGAGGACCTC CAGCAGCATC CGAACGCGGA TATCCGCAAC
GCCCTTTACG ACGACTTCGC CGTGGACGGG GTGGTCTCCC TGGGGGACAA CTCGGTGAAC
ATCCGGGTGC GCATCAAGAC GGCACCGGGC ATGCAGTGGG CCGTCGGCCG GGCCTACAAC
GGGCTGGTCA AGAAGCGCCT GGATGCCGCG GGTATCGAGA TCCCCTTCCC ACACCGGACA
ATCTACTTCG GGGAGGATCA CCAGGGGAAC GCTCCGCCAA TGCGCCTAGC GCAGGTGGCC
TCCGCCTCGC CGAGCCCGGC CAGTATCACT CCGGCGGCAC CGACCGCCAG CGACCGGGTC
CACCACGATC CTACGGAGGA CTAG
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| Protein sequence | MFTRHPLTWL TAALTALVPA LALAEEPEEN PARSVAELTQ GAAQTLGEEL RAIGDLFKGF
EGEALGPQLW TLAQELADLG LIIAVTIGLL LLLRPLARPV FNRAESWAQR GDARLRTVRR
TVGVLGAALA DLATIFLAWI AGYAIALSFV GDVGGIEARE SLFLNAFLMV EGVKALLRIL
FARRNPHLRL IATDDEHANY WGKRLARMAG LIGYGLLFIG PFATMAVAEG VGQLAVLIVM
VLAFGYAVVL ALRNRHDVRE RLQASAAQSK VLFTRTMLSS LAWVWHWVVI LYFGALAVVT
ITQPDAALAF MGQATLQTAL AIGIGVFLAI VLTQATARRI RLSERNRRHF PLLEQRLNSY
LPFVLKIVRT AIIVVVIATV LDAWQLFDFS GWLTSEGGLQ TLGVIFSVSL VLLAATAVWL
LAASFIEHRL NPDVGHGTPS AREQTLLTLF RNAIAIILIT MTTMIVLAEI GINIGPLIAG
AGVLGLAIGF GAQKLVQDII TGVFIQLENA IDVGDIITAG GVTGTVEKLT IRSVNIRDLF
GTYHFIPFSS VDSVSNFTRH FAYHVGSYGV AYREDVDQVI PELEAAYEDL QQHPNADIRN
ALYDDFAVDG VVSLGDNSVN IRVRIKTAPG MQWAVGRAYN GLVKKRLDAA GIEIPFPHRT
IYFGEDHQGN APPMRLAQVA SASPSPASIT PAAPTASDRV HHDPTED
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