| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0179 |
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| Symbol | |
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| ID | 4710855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 207844 |
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| End bp | 209541 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854637 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001001775 |
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| Protein GI | 121996988 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGATA ACCGTCGCAG CCGAGTGATC ACCCAGGGCG TGGCCCGAAC CCCCAACCGC
GCGATGCTGC GCGCCGTCGG TTTCCGGGAT GAGGATTTCG AGAAGCCGAT CATCGGGGTC
GGCAACGCGC ACAGTACGAT CACCCCCTGC AACGTCGGGA TCGGCGCCAT GGCGCGGCGC
GCCGAGGAGG CGCTGCGCGA GGTGGGGGCG ATGCCGATGA AGTTCGGCAC CATCACCGTC
TCCGACGGGA TCACCATGGG CACCGAGGGC ATGAAGTACT CCCTGGTCTC CCGCGAGGTG
ATCGCCGATT CGATCGAGAC GGTGGGCGGT GGCCAGCGGA TGGACGGCAT GCTCGCCACT
GGTGGCTGCG ACAAGAACAT GCCCGGGGCG ATGATGGCCC TGGCCCGTCT GGATATCCCG
GGTATCTTCG TCTATGGCGG CACCATCAAG CCGGGTCATT ACAAGGGCGA GGATCTCACC
GTGGTCAGCG CCTTCGAGGC GGTGGGGCAG TACAACGCCG GCAACCTCTC CGAGGCCGAT
CTCAAGGGGG TCGAGGAGAA CGCCTGCCCC GGGGCGGGCG CCTGTGGCGG CATGTTCACG
GCCAACACCA TGTCCAGCGC CTTCGAGGCC ATGGGCATGA GCCTGATGGG CTCGTCCACC
GTCTCTGCCG AGGACGACGA GGCCCGGGAT GTGGCCGCCG AGGCGTCCCG GGTCCTGATG
GACGCTGTCC ATCACGACCG GCGCCCGTCC TCGATCCTCA CCCGCGAGGC CTTCGAGAAC
GCCTTTGCGG TGGTGATGGC CCTGGGCGGC TCCACTAACG CCGTGCTCCA CCTGCTGGCC
ATCGCCAATA CCGCCGAGGT GCCGTTCGAC CTCGACGACG TCGAGCGCAT CCGCCGCAAG
GTGCCGGTAC TCTGCGACCT CAAGCCGTCG GGCCGGTTCG TGACCAGTCA GTTCCACGAG
GTCGGCGGCA CGCCGCAGGT GATGCGCATC CTCCTGGAGC AGGGGCTGTT GCACGGCCAC
TGCCAGACCA TCACCGGGCA GACCATCGAG GCCCTCATCG GCCACCTGCC GCCGGAGCCG
CCGGCGGATC AGGAGATCAT CATGCCCTTC GATCGGCCGC TCTATCCCGA GGGTCACCTG
GCAATCCTGC GGGGCAACCT GGCTGAAGAG GGTGCCGTGG CCAAGGTCAG TGGCATCCAA
CAGCGCCGTA TCAGCGGACC GGCCCGCGTG TTCGATTCCG AGGAGGAGTG CCTGGAGGCC
ATCCTGGCCG ACGGGGTGCA GGCCGGTGAC GTGGTGATCG TCCGCTACGA GGGGCCCAAG
GGAGGGCCCG GCATGCGCGA GATGCTGGCG CCCACCTCGG CGATCATCGG CAAGGGGCTC
GGCGATGCGG TGGGGCTGAT CACTGACGGC CGTTTCTCCG GCGGGACCTA CGGGATGGTG
GTCGGGCACG TGGCGCCTGA GGCCTACGAC GGCGGGACCA TCGCGCTGAT TGCCGAGGGC
GATACGGTGA CCATCGACGC CGACCAGAAC CTGCTTCAGG TGGAGGTGGA TGACGCGGAG
CTCGAGCGTC GCCGCAGCCA GTGGCAGGTG CCCCGGCCTC GCTACCGTCG CGGGGTGTTG
GGCAAGTATG CGCGCCTGGC GGCCTCGGCC AGTCGCGGTG CAGTGACCGA CGCCGACCTC
TTCCCCGAGC AGGAGTAG
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| Protein sequence | MADNRRSRVI TQGVARTPNR AMLRAVGFRD EDFEKPIIGV GNAHSTITPC NVGIGAMARR
AEEALREVGA MPMKFGTITV SDGITMGTEG MKYSLVSREV IADSIETVGG GQRMDGMLAT
GGCDKNMPGA MMALARLDIP GIFVYGGTIK PGHYKGEDLT VVSAFEAVGQ YNAGNLSEAD
LKGVEENACP GAGACGGMFT ANTMSSAFEA MGMSLMGSST VSAEDDEARD VAAEASRVLM
DAVHHDRRPS SILTREAFEN AFAVVMALGG STNAVLHLLA IANTAEVPFD LDDVERIRRK
VPVLCDLKPS GRFVTSQFHE VGGTPQVMRI LLEQGLLHGH CQTITGQTIE ALIGHLPPEP
PADQEIIMPF DRPLYPEGHL AILRGNLAEE GAVAKVSGIQ QRRISGPARV FDSEEECLEA
ILADGVQAGD VVIVRYEGPK GGPGMREMLA PTSAIIGKGL GDAVGLITDG RFSGGTYGMV
VGHVAPEAYD GGTIALIAEG DTVTIDADQN LLQVEVDDAE LERRRSQWQV PRPRYRRGVL
GKYARLAASA SRGAVTDADL FPEQE
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