| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0172 |
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| Symbol | |
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| ID | 4710838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 201045 |
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| End bp | 201860 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639854630 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001001768 |
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| Protein GI | 121996981 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.171196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGGA TCGATATCGG CGCCAACCTG ACCCACCACA CCTTTCGCAA GGATCTCCAC
CAGGTCCTCG AGCGTGCCGA GGCCGCGGGG GTCAGCCAGC TCTTCGTCAC CGGGACCGAT
GAGAGCGAAT CGGTCAAGGC GCAGGCCCTC GCCGCGCAGC ACCCCGGCCG ACTCTTCGCC
ACGGCCGGCT TCCATCCGCA TATGGCGAAG ACCTTCTCCA GCGACTCGGA GTCGGTCCTG
CGCGATCTGG CCTCGCGGCC GGAGGTGGTC GCCATCGGCG AGACCGGACT CGATTTCTAC
CGTAACCACT CCCCGCCGGA GGTCCAGCAA CGCGTCTTCG AACGCCACCT GGAACTGGCC
GCGGAGCTCA AGCTGCCGGT CTTCCTGCAC CAGCGCGATG CCCACCAGCG GTTCAGCGAG
ATCCTCCGCG CCTACCGCGA CCACCTCGTG GACGGGGTTG CGCACTGTTT CACCGAGGGT
CCCGAGATCG CTCAGGCGTA CCTGGATCTG GGCCTGCACA TCGGGGTGAC CGGCTGGATC
TGCGACGACC GGCGTGGCCA GGCCGTGCGG GACGCTGTGC GGGTGATCCC GCCGGAACGG
CTGATGGTGG AGACCGACTG CCCCTACCTG CTCCCCCGCG ACGTCAACCC CGAACAGGTC
GGGCTGCCGG TCAAGAATCG ACGCAACGAG CCGTGCCTGA TGCCCCACAT CGGGCGGGCG
GTGGCCCACT ATACCGGCCG CGATGTCACG GAACTCGCCG AGACCTCCAG CCGGGTGGCG
CGCCGCTTCT TCCGCGTCGA GGCGCCCTCC CGCTAA
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| Protein sequence | MEWIDIGANL THHTFRKDLH QVLERAEAAG VSQLFVTGTD ESESVKAQAL AAQHPGRLFA
TAGFHPHMAK TFSSDSESVL RDLASRPEVV AIGETGLDFY RNHSPPEVQQ RVFERHLELA
AELKLPVFLH QRDAHQRFSE ILRAYRDHLV DGVAHCFTEG PEIAQAYLDL GLHIGVTGWI
CDDRRGQAVR DAVRVIPPER LMVETDCPYL LPRDVNPEQV GLPVKNRRNE PCLMPHIGRA
VAHYTGRDVT ELAETSSRVA RRFFRVEAPS R
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