Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0166 |
Symbol | |
ID | 4710832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 195284 |
End bp | 195907 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639854624 |
Product | hypothetical protein |
Protein accession | YP_001001762 |
Protein GI | 121996975 |
COG category | [S] Function unknown |
COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGTGG ACCGCAGGAA GGCGGTTCGG GGTGATCGCC GCCCCGGGCG CTCCCCGTGC GCCGGCTCCG CCCCCGCACG ACGTTCGCTG ATACCCTCCG TTACGGCTCG CCCCCTTGGC TGGGGTGTGG CACTGCTCCT GTGTGCCTGG GCGGCAGCAG GGTGTACGCC CCGGGTCGAA CTCGACATGA CCGCCGGGCC TCAGCTCAAC CCTGGACCGC AGGGGGAACC GCTCTCGGTC CTCCTGCGAG TCTATCAGCT CGACGACCGC ACGCCCTTCG AAGACGCGGA CCGCGCGGCA CTGACCCGGG ATGACCGCGC CGCGCTGGGC GGCTGGGAGC AGCGGCGCGA GCTGGTCCTG CAACCCGGCG AGCGCAAGGA AGTCGAGCTG GAGATGGCCG ACCCGGCCGG TTATCTGGCA GTGGCCGTCT TCTACCTCGA TGAGCAGGCC GAGCGCTGGC GTCTCCTGGA GCCTTTGCCG GAATCCTTCC TGGGGATGCG CCCCGGCCAG AGGATCACCC TGGCGCTGGA TGGGGGTGCG CTGTGGGCGG GCAGCGAGGC CGAGCGCAGG CGCGCCGCCT GGCAGCGGGA GGATGTCGCC GGGCAGCGTT CGGCAGGGCT TTGA
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Protein sequence | MDVDRRKAVR GDRRPGRSPC AGSAPARRSL IPSVTARPLG WGVALLLCAW AAAGCTPRVE LDMTAGPQLN PGPQGEPLSV LLRVYQLDDR TPFEDADRAA LTRDDRAALG GWEQRRELVL QPGERKEVEL EMADPAGYLA VAVFYLDEQA ERWRLLEPLP ESFLGMRPGQ RITLALDGGA LWAGSEAERR RAAWQREDVA GQRSAGL
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