Gene Hhal_0130 details

Gene Information

• Locus tag: Hhal_0130
• ID: 4710661
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 149377
• End bp: 150015
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 639854588
• Product: TetR family transcriptional regulator
• Protein accession: YP_001001726
• Protein GI: 121996939
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCATGG AGAAGACCAG ACCCGGTTTG ACCCAGGGGG TGGGGCCGGC CACGGAGCGC 
GGGGAGCGGA CGCGCCGTAA ACTGCTCGCC GCCGCCGAGG TGGAATTCGG CGAGAAAGGG 
TTCCACACCG CATCGATCAG CAGCATCACC CAGCGCGCCG GTGTGGCCCA AGGTACGTTT 
TACCTCTACT ACCGCTCCAA GGAGGAGATC TTCCGCGCCC TGGTCGAGCA CATGAACCGA 
ACCATGCGCC GCTACCTCAG CGAGGCCATT GAGGACGCGG CCAACCGGGC CGAGGCCGAG 
CGCATCGGCC TGGAGGCGTT TCTACGCTTC TGCCGGGAAC ACGAAAACCT CTACCGGATC 
GTGATGGAGT CGCAGTTCGT CGATCCGGAG GCCCACCGCT GGTATTTCCA GACCCTGGCG 
GGCGGCTACG CCGAGCGACT CAAGGCCGCG CAGGCCCGTG GCGAAGTTCG CAACGGCGAC 
CCGTACACCC AAGCCCTAGC TCTGATCGGC ATGGCATTCT TCATGGGTAA GCGCCACCTG 
ATCTGGAGCC AGGACTGTGT CCCCGAGGCC GACGCCCTGG CGGCAGCCTC TGAGATCATC 
CAGCACGGCA TCACCCCGGA CACTGGCAAG CCGCGGTAG 

 

Protein sequence

MAMEKTRPGL TQGVGPATER GERTRRKLLA AAEVEFGEKG FHTASISSIT QRAGVAQGTF 
YLYYRSKEEI FRALVEHMNR TMRRYLSEAI EDAANRAEAE RIGLEAFLRF CREHENLYRI 
VMESQFVDPE AHRWYFQTLA GGYAERLKAA QARGEVRNGD PYTQALALIG MAFFMGKRHL 
IWSQDCVPEA DALAAASEII QHGITPDTGK PR