| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0122 |
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| Symbol | |
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| ID | 4710625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 139745 |
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| End bp | 141481 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639854580 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_001001718 |
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| Protein GI | 121996931 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGC ACATCCGGCG GCGTCCAGCG GGTGCGGCAC TTCCGGAAGA CGCTGTTGAG
GGGCTGCACC CCGTTTTGCG GCGTGTCTAT GAACGGCGGG GGCTGCGCGA TTCCGGGGAA
CTCGATCTGA GTCTGCGCCG GCTGCAACCG CCGAGTGGCC TGGCCGATCT GGATCGCGCA
GTCCGCGCGC TGATACCCGC CCTGCGCGCC GGGCAGCGGA TCGTCGTGGT CGGGGATTAC
GACGCCGATG GAGCCACGGC CACCGCGCTG ATGGTGCTGG CTCTCCGGCG GCTGGCGAAG
GCCGCCGGCG GCGATCCAGC CGCAATCGAA TCCTTTGTAC CCGACCGGTT CTCCCTCGGC
TACGGCCTCA GTGGGGCCGT TGTCGAGCGT CTGCGCCCGA TGGAACCGGA TTGGCTGGTG
ACAGTGGACA ACGGTGTGAC CAGCGTGGAA GGGGTTGCAG CGGCGCGGCA GGCGGGTATG
GGTGTCGTGG TCACCGACCA CCATGCGCCG GGGGAGTCGC TGCCCGCAGC CGAGGCGGTG
GTAGATCCCC TGCGCGAGGA TGATCACTTC CCGACTACCG CACTGGCGGG GGTCGGGGTG
GCGTTCTACC TGGCGCTGGC GCTGCGGCGT GGCCTTGAGG CCGATGGCGG CCTCCGAGAA
GAGACGGCGT CGCTGCTCGA GCTCCTCGAC CTCGTGGCGG TGGGGACCGT CGCCGACCTG
GTGCCTCTCG ATCACAACAA CCGCATCCTG GTGGAGCAGG GGCTGCGGCG GATCCGTGCC
GGTGTGGTGC GCCCAGGCAT TGTCGCACTG TTGGAGGTAG CCGGCCGGGA GCCCACGGAG
GTGACGGCTG CCGATCTCGC TTTCGCCGTG GGACCGCGCC TGAATGCCGC CGGGCGGATG
GACGACATGA CGGCTGGGGT CGACTGCCTG CTCGAAGAGG ATCCGCAGCG GGCCCGTGAG
CGGGCGGCGG GGCTGGATGG TCTCAATCGC CAGCGGCGCG AGGTGGAGGC GCAGATGACC
GAAGAGGCCC TGGCCAGCCT GGAGGCGCAG GCAGAAGACG TGGGCCTCGG CGTCTGTGTG
GCCGCGCGGG GCTGGCACCA GGGTGTCACC GGTATTCTGG CATCGCGGCT GAAGGAGCGC
TACCACCGCC CGGCGGTGGC CTTCGCCCCG GCCGACGGGG GTAGGCTGCG GGGCTCCGCG
CGGTCGGTGC CGGGGCTGCA CATGCGCGAC CTGCTGGCGC GCATCCACGC GCGTTCACCG
AGCCTGATCG AGTGTTTCGG CGGCCACGCC ATGGCCGCGG GGCTGACCAT CGAGTCCGGG
CAGCTGGATG CGTTTCGCCG TGCCTTCGCC GGCGCCCTCG ACGACGCCTT GGGGGGCGAG
TTGCCCAAGC TCCGCTTGGA GACCGATGGT GCCCTGGCGC CGGAGGAGCT CAATCTGGAG
ACCGCCTGGG CCCTGCGCTA CGGCGGGCCG TGGGGGCAGG GATTCCCGGA GCCGTGCTTC
GACGGGGTGT TCCGGATCGA GAGGGCCAAG GAACTCCGCG GTGGCCACCT CCGCCTGGAG
CTCTCCAACG GAGACGGTAC CGGTCCGGTT TTCCCGGCTA TCGCATTCGG TGGCGTCGAA
CGGGGGTGGG ATCGGCTGCA GGGCGCGGTT CATGCCATCT ACCGCCCCGA GGTCAACCGG
TTCCGGGGGA GTGTCGAGCT GCAGCTACGC ATCGACTACC TCACTGCCGC CGGATGA
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| Protein sequence | MPEHIRRRPA GAALPEDAVE GLHPVLRRVY ERRGLRDSGE LDLSLRRLQP PSGLADLDRA
VRALIPALRA GQRIVVVGDY DADGATATAL MVLALRRLAK AAGGDPAAIE SFVPDRFSLG
YGLSGAVVER LRPMEPDWLV TVDNGVTSVE GVAAARQAGM GVVVTDHHAP GESLPAAEAV
VDPLREDDHF PTTALAGVGV AFYLALALRR GLEADGGLRE ETASLLELLD LVAVGTVADL
VPLDHNNRIL VEQGLRRIRA GVVRPGIVAL LEVAGREPTE VTAADLAFAV GPRLNAAGRM
DDMTAGVDCL LEEDPQRARE RAAGLDGLNR QRREVEAQMT EEALASLEAQ AEDVGLGVCV
AARGWHQGVT GILASRLKER YHRPAVAFAP ADGGRLRGSA RSVPGLHMRD LLARIHARSP
SLIECFGGHA MAAGLTIESG QLDAFRRAFA GALDDALGGE LPKLRLETDG ALAPEELNLE
TAWALRYGGP WGQGFPEPCF DGVFRIERAK ELRGGHLRLE LSNGDGTGPV FPAIAFGGVE
RGWDRLQGAV HAIYRPEVNR FRGSVELQLR IDYLTAAG
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