Gene Hhal_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0116 
Symbol 
ID4710747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp131052 
End bp132056 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID639854574 
Productlipoyl synthase 
Protein accessionYP_001001712 
Protein GI121996925 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAGT TCAAGGGGAT TCCGGTGAGC AGCGGCAGCG TGGTCGAGCG CGATGGGGTG 
CGTACCATCA AGGACGGTGT TAAGCGCCGT GATGATGGCC AAGGGGCGGT GCGTCGGCGC
AAGCCCCAGT GGCTCAAGGC CCGCGCGCCG GGCGGAGAGG GCTACCGAAG CGTGCGCGGC
ATTGTCCACG ACCACCACCT GAGTACCGTG TGCGAGGAGT CCCACTGTCC CAACCTCGGG
GAGTGCTGGA GTCACGGCAC CGCCACCTTC ATGGTGCTCG GGTCGGTCTG TACCCGTACC
TGCCGTTTCT GCTCGGTGGA TACCGGGAAC CCCAAGGGGC GGCTGGATCC CCAAGAGCCG
GAACACTGCG CCGAGTCAGT CCGTCTGATG GGGCTGCGGT ACGTGGTGCT GACCTCGGTG
GACCGGGATG ATCTGCCCGA TGGCGGCGCA GAGCACTACG CCCAGTGCGT CCGTGCGATC
AAGGCCGATA ATCCGGATAC CGCCGTTGAG GCCCTGACGC CGGACTTTCG GGGCGACGAG
GAGGCTGTGC GCACCGTGGT CGATTCCGGG TTGGAGGTCT TCGCCCACAA CGTCGAGGTG
GTCCGACGCC TGTCGCCGCA GGTGCGTGAT CCGCGCGCCG GCTACGAGCA GAGCCTGGCG
GTGCTTCAGG TGGCCAAGCG GTTGCGCCCC GGGGTGCTGA CCAAGTCGAG TTTGATGGTC
GGTCTCGGCG AGACCGACGC GGAAATCGAC GAGGCGTTCG ATGACCTGCT TCGGGCGGAG
GTCGACATCG TCACCCTCGG GCAGTACCTG CAGCCGACCC GCAACCACCT CCCAGTGGAG
CGTTTCGTGA GTCCCGACGA ATTCGAGGCC CTTCGGCAAG AGGGGCTCAG GCGTGGGTTC
CGCGAGGTTG TAGCTGGGCC GCTGGTGCGC TCGAGTTACC GCGCCGACCG GGTGCTGGAG
GGGAACAACG TCGGCCTTCC CTCCGTCGGA CCGGACGTTG GCTGA
 
Protein sequence
MSEFKGIPVS SGSVVERDGV RTIKDGVKRR DDGQGAVRRR KPQWLKARAP GGEGYRSVRG 
IVHDHHLSTV CEESHCPNLG ECWSHGTATF MVLGSVCTRT CRFCSVDTGN PKGRLDPQEP
EHCAESVRLM GLRYVVLTSV DRDDLPDGGA EHYAQCVRAI KADNPDTAVE ALTPDFRGDE
EAVRTVVDSG LEVFAHNVEV VRRLSPQVRD PRAGYEQSLA VLQVAKRLRP GVLTKSSLMV
GLGETDAEID EAFDDLLRAE VDIVTLGQYL QPTRNHLPVE RFVSPDEFEA LRQEGLRRGF
REVVAGPLVR SSYRADRVLE GNNVGLPSVG PDVG