Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0084 |
Symbol | |
ID | 4710535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | + |
Start bp | 97972 |
End bp | 99594 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639854542 |
Product | hypothetical protein |
Protein accession | YP_001001681 |
Protein GI | 121996894 |
COG category | [S] Function unknown |
COG ID | [COG4425] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.42899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTGA TCGGCCCCCT GTCCACTGTC GGCCTGCTAC TCGGCACGCT CTTCTTCGCC TTCTCGCTCA CGCCGAGCCT GGTTCCCAGG CCTTTCGCCT TTCAGGGCGT CCTCTCCGGC CTCTCGCTGA CCGCCGGATA CGCCATCGGT GCGGGGCTGA GCACACTGTG GCATTACCTT CAGCTACCGG AACTGCGTGG ACGGCTCGAG CGGATCGTGC GCTGGCTGGC CGTAGCCGGC TGCGCCCTGG TTGCGGTGAT CTTCATGTGG CGAGCTGCGG GCTGGCAGGA TGCGGTGCGC GCGCAGATGG AACTGGAACC GGCCGGCGGA CTGCCGCCAG TCGGTGCTGC CCTGGTCGCC CTGTTGGTCT TTGCGGCCGC TCTACTTCTG GCGCGACTCT TTCGGGGAAC CTTCCGCTTC CTCTCGCTGC GCCTGCAGCG TTACATCCCG CCGCGGGTGT CGCACCTGGC GGGGATCGTC GTCGCGGTCG GCCTGTTCTG GGCTGTGATC GACGGCGTGC TGTTCACCAT GGCCCTGCGT GCCGCCGACA GCTCCTATCA GCAGGTGGAC GCCCTGATCG AGGCCGATCA GGAGCGCCCG AGCGAACCCG AGCGCGCCGG CAGCCCCGAC TCGGTGGTCG CCTGGCGAGA TCTCGGACGC CAAGGGCGAA GCTTCGTCTC CTCCGGGCCC ACAGCCACGG AACTGAAGGC GTTCCTCGGC GAGCCGGCGC CGACACCGAT CCGCATCTAC ATCGGCCTGA ACGCCGCCGA GACGCCGGAA GAGCGCGCCC AGCTCGCCAT GGACGAACTC CACCGCACCG ACGCCTTCGA CCGCTCGGTA CTGGTCCTCG CCACTCCCAC TGGCACCGGG TGGATCGACC CTGCGGCGGC CGACCCAGTG GAGTATCTCC ATCGCGGGGA CATCGCCACG GTGACCGCTC AATACTCGTA TCTGCCCAGT CCTCTGGCGC TGATGGTCGA AGGCAGCTAT GGGGCCGAGA TGGCCCGAGC CCTGTTCGAG GCGGTCTACG GCCACTGGCA GACCCTGCCC GAGGACGAGC GTCCGGCTCT CTACCTGCAC GGCCTGAGTC TCGGGGCCCT GAACTCGGAT CGGGCCTTTG ATGTCTTCGA CATCATCCAA GACCCCTTCG ATGGCGCGCT ATGGAGTGGC CCCCCATTCC GCAGTGAGAC CTGGCGGACC GTCACCCAAC GCCGTGATGC CGGATCCCCT GCCTGGCTGC CGGAATTCCG CGAAGGCGAG GTGGTGCGCT TCATGAATCA AGAGACCGGC CTCGACGCTG CCAACGGCGA CTGGGGTACG TTCCGGCTCG CCTTCCTGCA GTACGCCAGC GATCCCATCA CGTTCTTCAG CCCGAGCATC CTCTACCGGG AGCCGGACTG GATGGCCGAG CCACGGGGCC CTGACGTCAC CTCGGAACTG CGCTGGTACC CGGTCGTGAC CATGCTGCAG CTGGCTGCCG ACATGGCGGC TGGCGGCGCT CCGCCCGGGT ACGGCCACAC CTACGCCGCG GAGGACTACA TCGACGCCTG GGTTGCGCTG ACCGAACCAG ACGACTGGAG CCGCGACGAC CTAAAGCGGC TACGCCAGGC GTTCAGACGC TGA
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Protein sequence | MRLIGPLSTV GLLLGTLFFA FSLTPSLVPR PFAFQGVLSG LSLTAGYAIG AGLSTLWHYL QLPELRGRLE RIVRWLAVAG CALVAVIFMW RAAGWQDAVR AQMELEPAGG LPPVGAALVA LLVFAAALLL ARLFRGTFRF LSLRLQRYIP PRVSHLAGIV VAVGLFWAVI DGVLFTMALR AADSSYQQVD ALIEADQERP SEPERAGSPD SVVAWRDLGR QGRSFVSSGP TATELKAFLG EPAPTPIRIY IGLNAAETPE ERAQLAMDEL HRTDAFDRSV LVLATPTGTG WIDPAAADPV EYLHRGDIAT VTAQYSYLPS PLALMVEGSY GAEMARALFE AVYGHWQTLP EDERPALYLH GLSLGALNSD RAFDVFDIIQ DPFDGALWSG PPFRSETWRT VTQRRDAGSP AWLPEFREGE VVRFMNQETG LDAANGDWGT FRLAFLQYAS DPITFFSPSI LYREPDWMAE PRGPDVTSEL RWYPVVTMLQ LAADMAAGGA PPGYGHTYAA EDYIDAWVAL TEPDDWSRDD LKRLRQAFRR
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