Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0058 |
Symbol | |
ID | 4710355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 66163 |
End bp | 67236 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639854516 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001001655 |
Protein GI | 121996868 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG AAGTCCCGAC CATTTGCCCC GGTAGCCCGG AACTGCCGGA TCTCAGCGAA GCGCCGGGGA CGTTCTACCT GGCTCCGCCG CTGCAGCACA CGCGGGACCG TGTTTACGTG CATCTGGGTG ATGCGGGCTG GCGGATCCGC TTCCCCGCTG CGGGGGTCAT GGGGGTCGAG GTGCCGGCAC AGTCCCTGCC GGCGCTGCTC GCTGCCCTGG AGCCGCTGAT GAGCGAGCCG GAGATGGCCG CGGGCTCCGC CGTCTTCATG GAGCAGGGCG CGGCGTTCGA TGCCGGATCG TTGTTCCAGG CCCGCCCGCT ATCCACCTGG GTGGCGCGTG CCGAGCATGA TTGGCTGCTG GATACGATCC GCAGCGAGCG GGTGCAGATC CACTACCAGC CCATCGTCGA GGCGCGGGAG GCGCAGCGCG TCTACGCCTA CGAGTGCCTG ATGCGCGGGG TCGATGCCGA CGGGGGGACG ATCCCGCCCG GGTCGATGTT CCGGGCAGCG GAGCTGGCTG ATCTGGAGTT CTACCTCGAT CGTCTGGCGC GCGTGGCGGC GATCCGCGAT AGCCACGCCC AGGGGGTCCA GGAGAATCTG TTCATCAACT TCCGGCCCAC GGCCATCTAC GACCCGGCTT TCTGCCTGCG GACCACCGTG GGGGCTGTAG AGAAGCTCGG CCTGGATCCG CGCCGCATCG TGTTTGAGGT GGTGGAAAGC GAGGCGATCA CCGATCATCG CCACCTGCGC CACATCGTCG ATGAGTATCG GCAGGGCGGC TTCCGCATCG CCCTGGACGA TCTCGGTGCC GGCTACGGGT CCCTGAACTT GCTCAAGGAC CTGGAGCCGG ATTTCGTTAA GATCGACCGC GAGCTGATTC GGCACGTACA CCACAACCCT GGTCAGGCCA CCATCGTCGA GGCGATGGTC AGCATGGCCC GCAATCTGGG GATCACCACC GTCGGGGAGG GGATCGAGGA GCGGGAGGAG TTCGAGTGGC TGCGCGCAGC GGGGATCGAT CTGGTCCAGG GGTTCTACTT CGCGCGACCG GCGTCACCAC CCCCTCGACT GTGA
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Protein sequence | MTIEVPTICP GSPELPDLSE APGTFYLAPP LQHTRDRVYV HLGDAGWRIR FPAAGVMGVE VPAQSLPALL AALEPLMSEP EMAAGSAVFM EQGAAFDAGS LFQARPLSTW VARAEHDWLL DTIRSERVQI HYQPIVEARE AQRVYAYECL MRGVDADGGT IPPGSMFRAA ELADLEFYLD RLARVAAIRD SHAQGVQENL FINFRPTAIY DPAFCLRTTV GAVEKLGLDP RRIVFEVVES EAITDHRHLR HIVDEYRQGG FRIALDDLGA GYGSLNLLKD LEPDFVKIDR ELIRHVHHNP GQATIVEAMV SMARNLGITT VGEGIEEREE FEWLRAAGID LVQGFYFARP ASPPPRL
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