| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0049 |
|---|
| Symbol | |
|---|
| ID | 4710342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhodospira halophila SL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008789 |
|---|
| Strand | - |
|---|
| Start bp | 51210 |
|---|
| End bp | 52085 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639854507 |
|---|
| Product | peptide chain release factor 2 |
|---|
| Protein accession | YP_001001646 |
|---|
| Protein GI | 121996859 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1186] Protein chain release factor B |
|---|
| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGATG ATGCCGACGA GATGGTCGCC ATGGCCCGGG AGGAGGGGGA CGCAGAGACC
CTCGAGGCGG TCCAGGCGGA CATCCAGCGT GTTGCCGGGC AGGTCGAGAC CCTGGAGTTC
CGCCGGATGT TCTCCGGCGA GATGGACACC TCCAACGCCT TTCTGGATAT CCAGGCCGGT
TCCGGGGGCA CCGAGGCCCA GGACTGGGCC GAGATGCTGC TGAGAATGTA TCTGCGCTGG
GCCGAGGCGC GCGGCTTCGA GACCGAGGTT ATCGAGGTCA CCGCCGGCCA AGAGGCGGGG
GTCAAGAGCG CCACGATCAA GGTCTCCGGC GAGTATGCCT TCGGCTGGCT GCGCACGGAG
ACCGGTGTGC ATCGCCTGGT GCGTAAGTCG CCCTTCGACT CAGGGGGGCG TCGGCACACC
TCGTTCTCCT CGGTGTTCGT CTCCCCCGAG ATCGACGAAG AGAATGTCGA TATCGAGATC
GATCCATCGG ATCTGCGCGT GGACGTCTTC CGCGCCTCGG GTGCCGGGGG GCAGCACGTC
AACACCACCG AGTCAGCGGT GCGTATCACC CACGAACCGA CGGGCATCGT GGTGCAGTCG
CAGAACGACC GGTCGCAGCA CAAGAACCGT GCGACGGCGA TGAGCCAGCT GCGCGCCAAG
CTCTACGAGC TGGAGATGCA GCGCCGCCGT GCCGAGGCCG AAGCGCAGGA AGACACCAAG
TCCGATATCG GCTGGGGCAA TCAGATCCGT TCCTATGTCC TCGATCAGTC CCGAATCAAG
GATCTGCGGA CGGGGGTCGA AATCGGCAAC ACGCAGGCGG TGCTCGACGG CCATCTCGAT
CCGTTCATCC AGGCGAGCCT CAAGGCCGGC CTCTGA
|
|---|
| Protein sequence | MLDDADEMVA MAREEGDAET LEAVQADIQR VAGQVETLEF RRMFSGEMDT SNAFLDIQAG
SGGTEAQDWA EMLLRMYLRW AEARGFETEV IEVTAGQEAG VKSATIKVSG EYAFGWLRTE
TGVHRLVRKS PFDSGGRRHT SFSSVFVSPE IDEENVDIEI DPSDLRVDVF RASGAGGQHV
NTTESAVRIT HEPTGIVVQS QNDRSQHKNR ATAMSQLRAK LYELEMQRRR AEAEAQEDTK
SDIGWGNQIR SYVLDQSRIK DLRTGVEIGN TQAVLDGHLD PFIQASLKAG L
|
|---|
| |