Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0048 |
Symbol | |
ID | 4710333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 49687 |
End bp | 51174 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639854506 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001001645 |
Protein GI | 121996858 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATA GCGACGAGAA CAAGCTCATC GCCCAGCGCC GCGAGAAGTT GCAGGGCCTG CGCGAGACCG GCCAGGCCTT CCCGAACGAT TTCCGCCGCG ATGCGCTGGC CGCCGACCTT CACGAGCGCT ACGGCCCGCT GGATAGCGAG GCCCTGGAGC AGGAGGGCGC CCGGGTGACA GTTGGCGGAC GCATGATGGC CAAACGGGTG ATGGGCAAGG CGAGCTTCGC GCAGCTGCAG GACAGCTCTG GCCGGATCCA GCTCTATCTG CGTCGGGACG ACCTGCCGGA AGGTGCTTAC GCCGCCTTCA AGGGCTGGGA TGTGGGCGAT ATCGTCGGTG CCACCGGGAC GATCTTTCGC ACCAAGAAGG GGGAGCTATC GATCCAGTGC GAGGAGATCC GGCTCCTGAC CAAATCCCTG CGACCGCTGC CGGAGAAGTG GCACGGGCTG AACGATCACG AGATCCGCTA CCGCCAGCGC TACTTGGATC TGATCGTCAA TGAGGAGAGT CAACGGGTCT TCGCCCTGCG CACCCGGGTG TTGGCTGCCA TGCGCCGCTT CCTCGACGAG CGCGGCTTCA TGGAAGTCGA GACCCCGATG ATGCAGCCGA TCCCCGGGGG CGCTGCGGCC CGGCCCTTCG TGACCCACCA CAACGCCCTG GGGCGGGATC TGTATCTGCG CATCGCGCCG GAGCTCTACC TCAAGCGGCT GGTGGTCGGC GGGTTCGAAC GCGTCTACGA AGTCAACCGC AACTTCCGGA ATGAAGGCGT ATCGACCCGG CACAATCCGG AATTCACCAT GCTGGAGTTC TATCAGGCCT TCGCCGATTA TCGAGACCTG ATGGACCTCA CTGAAGAGAT GCTCCGCCAC CTGGCCGAAC AGGCGCTGGG CTCCGGGCAG GTGACCTGGC AGGGTGAAAC TTACGACTTT GCATCAAGTT TTGAGCGTAT ATCACTGATT GAAGCGGTAC TTCGCTTCAA TTCGGACCTC GGCATCGAAG ATCTGACTGA GCGCGAGCGG GCGGCCCAGG CGGCGCAGGC GCGCGGGATC GAGGTGCCTC CCGGCGACGG GCTGGGCAAG ATCCAGGCGG CCCTGTTCGA GGAGACAGCC GAGCCCCGCC TGCACGGCCC CGTGTTCGTC ACCGACTACC CGAAGGAGGT GTCGCCGCTG GCCCGTCCGC TCGACGACGA CCCGTGCTAC ACCGAGCGCT TCGAGCTGAT CGTCGGTGGC CGCGAAATCG CCAACGGCTT CTCGGAGTTG AACGACGCCG AGGACCAGGC CGCGCGTTTC CGGGCCCAGG CGGCGGAGCG GGATGCCGGC GACCAGGAGG CGATGCACTA CGACGCGGAC TATATCCGTG CCCTGGAGTA CGGCCTGCCG CCGACCGCCG GCGAGGGGAT CGGGATCGAT CGGCTGGTCA TGCTGCTCGC CGACTGCGAT TCGATCCGCG ATGTCCTTCT GTTCCCCGCC ATGCGCCCCG AGTCTTAA
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Protein sequence | MSDSDENKLI AQRREKLQGL RETGQAFPND FRRDALAADL HERYGPLDSE ALEQEGARVT VGGRMMAKRV MGKASFAQLQ DSSGRIQLYL RRDDLPEGAY AAFKGWDVGD IVGATGTIFR TKKGELSIQC EEIRLLTKSL RPLPEKWHGL NDHEIRYRQR YLDLIVNEES QRVFALRTRV LAAMRRFLDE RGFMEVETPM MQPIPGGAAA RPFVTHHNAL GRDLYLRIAP ELYLKRLVVG GFERVYEVNR NFRNEGVSTR HNPEFTMLEF YQAFADYRDL MDLTEEMLRH LAEQALGSGQ VTWQGETYDF ASSFERISLI EAVLRFNSDL GIEDLTERER AAQAAQARGI EVPPGDGLGK IQAALFEETA EPRLHGPVFV TDYPKEVSPL ARPLDDDPCY TERFELIVGG REIANGFSEL NDAEDQAARF RAQAAERDAG DQEAMHYDAD YIRALEYGLP PTAGEGIGID RLVMLLADCD SIRDVLLFPA MRPES
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