Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0043 |
Symbol | sdhB |
ID | 4710322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 45076 |
End bp | 45864 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639854501 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_001001640 |
Protein GI | 121996853 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAGT TCAGGCTTCC CGCCAACTCC CGCATCCGCA AGGGCTACAC CTACCGTGCC CCCGACGCGG AGAAGAGCGA AAATATCCGG CGCATCCGGG TCTATCGTTA CGACCCGGAG GGCGGTGCGA CCCCGCGTAT GGACACCTAC GAGATCGATG CCGACAGCGC CGGTCCGATG GTCCTCGACG CCCTGATCAA GATCAAGGAT GAGGTCGACC CGACGCTGAC CTTCCGGCGT TCGTGCCGGG AGGGAATCTG CGGCTCCTGC GCCATGAACA TTGACGGGAC CAATACCCTC GCCTGCACCA AGGGCATGGA CGAGATCAAG GGCGATGTGA AGGTCTATCC CCTGCCGCAC ATGGATGTGG TCAAGGATCT GGTCCCCGAC ATGAATCACT TCTACGCGCA GTACGCCTCG CTGGAGCCGT GGATCAAGAC CGAGACGCCG ACGCCGCCGG ACAAGGAGCG GCTGCAGTCC AAGGAGGAGC GTGAGGCCCT CGACGGGCTC TACGAGTGCA TCCTGTGTGC TTGCTGTTCG ACCTCCTGCC CAAGTTACTG GTGGAACGGT GACCGCTACC TCGGTCCTGC GGCCCTGTTG CAGGCCTATC GGTGGATCGC CGATAGCCGC GACGAGGCAA CCGGCAAGCG TCTCGATGAG CTCGACGACT CGTTCAAGCT CTATCGATGC CATACCATCA TGAACTGCAC CGCGACGTGC CCGAAGGGCC TGAATCCGGG CAAGGCGATC GGTGCCATCA AACGGCTGAT CGCCGAGCGG GAGACGTGA
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Protein sequence | MAEFRLPANS RIRKGYTYRA PDAEKSENIR RIRVYRYDPE GGATPRMDTY EIDADSAGPM VLDALIKIKD EVDPTLTFRR SCREGICGSC AMNIDGTNTL ACTKGMDEIK GDVKVYPLPH MDVVKDLVPD MNHFYAQYAS LEPWIKTETP TPPDKERLQS KEEREALDGL YECILCACCS TSCPSYWWNG DRYLGPAALL QAYRWIADSR DEATGKRLDE LDDSFKLYRC HTIMNCTATC PKGLNPGKAI GAIKRLIAER ET
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