| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0037 |
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| Symbol | |
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| ID | 4710926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 38779 |
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| End bp | 40248 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639854495 |
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| Product | protease Do |
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| Protein accession | YP_001001634 |
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| Protein GI | 121996847 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTACAG TCAAACGGGG GCCGGCGCGG ATCACGCTGA CGGCCGGGCT AGGGCTGGGG
GTCAGCGCCC CCGTCGGTGC GCTCGAACTG CCGGACTTCA CCGAACTGGT TCGCGAGAAC
AGCGCGGCTG TGGTCAACAT CAGTACCCGC CAGGAGGCTC CGGGTCAGTC GGCCCCGGAG
GAGATGCTGC CCGAAGGGAT CGAGCCCCAG CAGGGGCCGC CGCCGGCCTC TGGCCTGCGT
CCCGTTTCTG CGCCGCTGGA CCCGCTGCAG ACCCCCGACC TGGAAGGATC CCGGCCCGGA
CCGGATCCGT TCGGTGACGA CGGCCAATCC CTCGGCTCGG GCTTCCTGAT CAGCGACGAT
GGAGTGATCC TGACTAATCA CCACGTCGTG GCACGGGCCG ACGAGGTCAT TGTCCGCCTC
TCGGATGGTC GCGAACACGA CGCCGACGTC GTAGGCTCGG ATGAGCGCAC CGACCTGGCG
GTGGTCGAGA TCGATACGGA CGACGAGCTG CCGACGGTGT CCGTGGGCAG TGCCGAAAAG
CTCGAGGTTG GCGAATGGGT GCTGGCCATC GGCTCGCCCT TCGGCTTCGA ACATTCGGTC
ACCGCCGGCA TTGTCTCCGC CAAGGGGCGC TCGTTGCCCC ACGGGAACTA CGTGCCCTAC
ATCCAGACCG ATGTGGCCAT CAACCCGGGG AACTCCGGCG GGCCGCTGTT CAATCTGGAG
GGCGATGTGG TCGGGGTCAA TTCGCAAATC TACAGCCGCA CCGGCGGCTT CATGGGGCTG
TCGTTCGCGA TCCCCATCGA GTTGGCCATC GATGTGGCGG AGCAGCTCCA GGCCACCGGC
GAGGTCGAGC GCGGCTGGCT CGGCGTGCTC ATCCAGGATC TCACCCGAGA CCTTGCCGAG
GGGTTCGGCC TTGAGCGTCC ACGCGGGGCT CTGGTTTCGG AACTGCTCGA CCATAGCCCG
GCTGCCGAGG CCGGCATCGA GAGCGGCGAC GTCATCCTCG AGTTTGACGG CGAGGTGGTG
GAGAACTCTG CGACCCTGCC GCCCATGGTG GGGCGTACCA GCATTGGGCG GACCGTCGAG
TTGCTGATCC TGCGGGATGG TGAGGAGAAG ACCCTGGAGG TCGAGGTGGC GGAGTTGCCG
GGCGAGGATG AACTCGCCGC CCCGTCGGAC GCCGTAGAGG GCGGCGGTGG CAGTGATCTG
GGCCTGCAGG TGGAGCCGGT GGACGACACC ACCCGACAGC AGTTGGAGCT AGACGACGAG
GGCGGGGTGC TGATCACGTC CGTCGAGGAG GGGCCGGCGG CCGACGCAGG CTTGCAGGTC
GGCGACGTGT TGGTGAGCTT CGATCGCCAG CCGGTTCACT CCGCGGAGGA CCTCAATGAC
GGTGCGGCTG CCGCCGACCC CGGTAGCACC GTGCCGGTGC TGGTCATTCG CGACGGGCAC
CCGAGTTTTC TGGCATTGCA AATGCCCTGA
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| Protein sequence | MGTVKRGPAR ITLTAGLGLG VSAPVGALEL PDFTELVREN SAAVVNISTR QEAPGQSAPE
EMLPEGIEPQ QGPPPASGLR PVSAPLDPLQ TPDLEGSRPG PDPFGDDGQS LGSGFLISDD
GVILTNHHVV ARADEVIVRL SDGREHDADV VGSDERTDLA VVEIDTDDEL PTVSVGSAEK
LEVGEWVLAI GSPFGFEHSV TAGIVSAKGR SLPHGNYVPY IQTDVAINPG NSGGPLFNLE
GDVVGVNSQI YSRTGGFMGL SFAIPIELAI DVAEQLQATG EVERGWLGVL IQDLTRDLAE
GFGLERPRGA LVSELLDHSP AAEAGIESGD VILEFDGEVV ENSATLPPMV GRTSIGRTVE
LLILRDGEEK TLEVEVAELP GEDELAAPSD AVEGGGGSDL GLQVEPVDDT TRQQLELDDE
GGVLITSVEE GPAADAGLQV GDVLVSFDRQ PVHSAEDLND GAAAADPGST VPVLVIRDGH
PSFLALQMP
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