Gene Hhal_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0034 
Symbolrnc 
ID4710271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp35408 
End bp36112 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID639854492 
Productribonuclease III 
Protein accessionYP_001001631 
Protein GI121996844 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC TGGAACGCCT GCAACAGCGT CTCGACTACC AATTCCTGGA GTTGGAGCGC 
CTCCAGGAGG CGGTCACGCA CCGAAGTGCC GGTGGCCGGC ACAATGAACG TCTGGAATTC
CTCGGTGACT CGGTTCTGAA TTTCGTCGTC GCCCACGAAG TGTTCCATCG GCGACCGACG
GATAGCGAGG GGACTCTGTC GCGACTCCGC GCCAGCCTGG TCAATCGCTC CAGCCTGGCG
GCCATCGCTC GGGATATTGA GCTGGGCGAC CACCTCCGGC TGGGCGGCGG CGAACTCAAA
AGCGGCGGCC ACCGGCGCGA CTCCATCCTT GCCGACGCCC TGGAGGCGGT GTTCGGCGCG
GTCTATCTGG ACGCCGGTTT CGAAACCGCA GCGCGGGTGA TCACCGGGTT GTACCGTTCA
CGACTGGAGA GCCTGCCCGA CAAGGCGGTC CTCAAGGATC CCAAGACCCG TCTGCAGGAG
GTTCTGCAGT CGACTCGCCG GCCGCTGCCG GGTTACCAGG TCCTGGATGT CCGGGGGCGA
GCCCATCATC AGCGGTTTCA GGTCGAGTGC CGGCTCAGCG ACAGCGAACA AACGACCCTC
GGCGAGGCCG GCAGCCGCAG GCAGGCCGAG CAGCGGGCCG CCGAGGCGAT GCTGGTCGAA
ATCGGAGCCG AGTCGGCGGA AGGAGGAGGG TCCGGGCATG AATGA
 
Protein sequence
MSDLERLQQR LDYQFLELER LQEAVTHRSA GGRHNERLEF LGDSVLNFVV AHEVFHRRPT 
DSEGTLSRLR ASLVNRSSLA AIARDIELGD HLRLGGGELK SGGHRRDSIL ADALEAVFGA
VYLDAGFETA ARVITGLYRS RLESLPDKAV LKDPKTRLQE VLQSTRRPLP GYQVLDVRGR
AHHQRFQVEC RLSDSEQTTL GEAGSRRQAE QRAAEAMLVE IGAESAEGGG SGHE