Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hhal_0034 |
Symbol | rnc |
ID | 4710271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhodospira halophila SL1 |
Kingdom | Bacteria |
Replicon accession | NC_008789 |
Strand | - |
Start bp | 35408 |
End bp | 36112 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639854492 |
Product | ribonuclease III |
Protein accession | YP_001001631 |
Protein GI | 121996844 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGATC TGGAACGCCT GCAACAGCGT CTCGACTACC AATTCCTGGA GTTGGAGCGC CTCCAGGAGG CGGTCACGCA CCGAAGTGCC GGTGGCCGGC ACAATGAACG TCTGGAATTC CTCGGTGACT CGGTTCTGAA TTTCGTCGTC GCCCACGAAG TGTTCCATCG GCGACCGACG GATAGCGAGG GGACTCTGTC GCGACTCCGC GCCAGCCTGG TCAATCGCTC CAGCCTGGCG GCCATCGCTC GGGATATTGA GCTGGGCGAC CACCTCCGGC TGGGCGGCGG CGAACTCAAA AGCGGCGGCC ACCGGCGCGA CTCCATCCTT GCCGACGCCC TGGAGGCGGT GTTCGGCGCG GTCTATCTGG ACGCCGGTTT CGAAACCGCA GCGCGGGTGA TCACCGGGTT GTACCGTTCA CGACTGGAGA GCCTGCCCGA CAAGGCGGTC CTCAAGGATC CCAAGACCCG TCTGCAGGAG GTTCTGCAGT CGACTCGCCG GCCGCTGCCG GGTTACCAGG TCCTGGATGT CCGGGGGCGA GCCCATCATC AGCGGTTTCA GGTCGAGTGC CGGCTCAGCG ACAGCGAACA AACGACCCTC GGCGAGGCCG GCAGCCGCAG GCAGGCCGAG CAGCGGGCCG CCGAGGCGAT GCTGGTCGAA ATCGGAGCCG AGTCGGCGGA AGGAGGAGGG TCCGGGCATG AATGA
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Protein sequence | MSDLERLQQR LDYQFLELER LQEAVTHRSA GGRHNERLEF LGDSVLNFVV AHEVFHRRPT DSEGTLSRLR ASLVNRSSLA AIARDIELGD HLRLGGGELK SGGHRRDSIL ADALEAVFGA VYLDAGFETA ARVITGLYRS RLESLPDKAV LKDPKTRLQE VLQSTRRPLP GYQVLDVRGR AHHQRFQVEC RLSDSEQTTL GEAGSRRQAE QRAAEAMLVE IGAESAEGGG SGHE
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