Gene Hhal_0032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0032 
Symbol 
ID4710259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp33797 
End bp34501 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID639854490 
ProductDNA repair protein RecO 
Protein accessionYP_001001629 
Protein GI121996842 
COG category[L] Replication, recombination and repair 
COG ID[COG1381] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00613] DNA repair protein RecO 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACGGCG CGCAGGGGCA GCCGGCCTGG GTGCTTCACC GCCGCGCCTT TCGGGAGAGC 
AGCACCCTGG TGGAACTGTT CAGCCAAGAG TATGGACGCA TCGGCGCGGT CGCCAACGGC
GTGCGGCGAC GGGGCTGGAG CGGGCAACTC GAGCCCTTCA TCCCGCTTCA GGTGAGCTGG
CGTGGGCGCG GCGACCTCAA GACTCTGACC ACCGTCGATC AGGCAGGACG CGGTTACGCC
CTGCGGGGCG GGGCGCTGGC GTGCGGTTTT TACATGGCGG AAGTTCTGCT GGCCCTGACC
CGTCGTGAGG ACCCGCACCC GCGCACGTGG GAACGCTACG CCGTAGCCGT GGATTGCCTG
GCCACGGACG ATGCGGAGCC TGCACTGCGG CGCTTCGAGC TGGCCCTTCT TGAAGAGAGC
GGCTACGGGT TGGAATTGGA ACAGGACGTC CACGGCGAGC CGGTCGTGGC GCAGGCGCGA
TATCGTTACT CCCCGGAACG GGGGGCGGAC CGGGCAGGCA CGGGCGAGTG CGGCGTGGAG
GTCAGTGGTG CCACACTGCT GGCACTAGCG GCCACGGAAG GGCAGGGGTT GTCTGAAGAA
CCGGTGCGCA GCGAGGCGCG GCGGCTGATG CGGGCGGTGA TCCAGCAGCA TCTGGGTGGG
CGCCGACTGC GCAGTCGCGA GATGTTCCGC TCGCTGCGCG ATTGA
 
Protein sequence
MNGAQGQPAW VLHRRAFRES STLVELFSQE YGRIGAVANG VRRRGWSGQL EPFIPLQVSW 
RGRGDLKTLT TVDQAGRGYA LRGGALACGF YMAEVLLALT RREDPHPRTW ERYAVAVDCL
ATDDAEPALR RFELALLEES GYGLELEQDV HGEPVVAQAR YRYSPERGAD RAGTGECGVE
VSGATLLALA ATEGQGLSEE PVRSEARRLM RAVIQQHLGG RRLRSREMFR SLRD