| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0014 |
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| Symbol | |
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| ID | 4710147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | + |
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| Start bp | 14225 |
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| End bp | 15424 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639854470 |
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| Product | TraB family protein |
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| Protein accession | YP_001001611 |
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| Protein GI | 121996824 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGAAA CCACCCCCAG CGGTCCGCGC AAGCACATCA CCGTCAACGG CACCGAGTTC
GTGCTCCTGG GTACGGCGCA CATCTCCCAG GCCAGTACCG AAGAGGTCCA GCGTGAGGTG
GCCAGTGGCG CCTACGATGC GGTCGCCATC GAACTGTGCG AGAGCCGTCT GCGCGCCTTC
CGCGAGCCCG ATCATCTGGA GCGGATGGAC CTGTTCCAGA CCCTGCGTGA CGGACGCGGG
GGACTGGTCA TGGCCAGTCT CGCGCTGGGC GCCTATCAGC AGCGCCTAGC GGAGCAACTC
GGGGTCGATC CCGGGGCGGA GATGAAGGCG GCCGCGGCCG GGGCGGAGCA GTATGGGGCC
GATCTGGTGC TGGTTGACCG TGAGGTCGGG GTCACCATGC GCCGCCTCTA CCGCAATGTG
CCCTGGTGGC AACGCTTCGG GCTCATCGGC GGACTGATCG GCAGCCTCGC CTCTTCCCAG
CGGATCAGCA GCGAGGAAGT GGAGCGGCTT AAGCAAGGCG ACCTGTTGGA GTCGACCTTT
CGCGAGCTGG CCCAGAGCAG TCGAGCCCTG TACCAGCCGC TGATCGATGA GCGCGATCGG
TACATGGCTG CCAGGCTCCT GGAGTCCGCC GCCGGGCGCT ACAAGCGTGT CCTCGTCGTC
CTCGGGGCCG GGCACCTGGA GGGGGTGACG CGCTATCTGG GGCAGGCCTC GGCGGATCCC
GGCGCCGAGC GCGAGGCGCT GGACCGTATG CCGCCCCCGG CACGCTGGCC ACGTTACCTG
GCCTATCTGG TCGCCATCGT GATCATCTCC GGCTTCGTCA TCGGGTTCAG CCGCAGTCCG
GAACTGGGCT GGACCCTGGT CGCCACTTGG GTGCTGATCA ACGGTGGCTT CTCGGCCCTG
GGCGCCGCCC TCGCCTACGG CCACCCGGTC ACCGTTGCCG GGGCCTTCCT GGCCGCCCCC
CTGACATCGC TCAACCCGAC CATCGGCGCC GGGTTTGTCG CAGCAGCGAT CGAGCTGACC
GTCCGGAGAC CGCGGGTCGG CGACTTCCGC GCCCTGCGCC AGCACGTGGC GCACTGGCGC
GGCTGGTGGA CCAACCGAGT GGCCCGAACC CTGCTAGTGT TCTTCTTCGC CTCGCTCGGT
TCGGCCGTTG GCACCTATCT CGCCGGCGCA CGCATCATTG AGCGCCTGAT TGCCGCCTAG
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| Protein sequence | MPETTPSGPR KHITVNGTEF VLLGTAHISQ ASTEEVQREV ASGAYDAVAI ELCESRLRAF
REPDHLERMD LFQTLRDGRG GLVMASLALG AYQQRLAEQL GVDPGAEMKA AAAGAEQYGA
DLVLVDREVG VTMRRLYRNV PWWQRFGLIG GLIGSLASSQ RISSEEVERL KQGDLLESTF
RELAQSSRAL YQPLIDERDR YMAARLLESA AGRYKRVLVV LGAGHLEGVT RYLGQASADP
GAEREALDRM PPPARWPRYL AYLVAIVIIS GFVIGFSRSP ELGWTLVATW VLINGGFSAL
GAALAYGHPV TVAGAFLAAP LTSLNPTIGA GFVAAAIELT VRRPRVGDFR ALRQHVAHWR
GWWTNRVART LLVFFFASLG SAVGTYLAGA RIIERLIAA
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