Gene Hhal_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHhal_0010 
Symbol 
ID4710496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhodospira halophila SL1 
KingdomBacteria 
Replicon accessionNC_008789 
Strand
Start bp9578 
End bp10555 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content68% 
IMG OID639854466 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_001001607 
Protein GI121996820 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATACCG TCTTCCTCGA CGCGGGGTCC CTGGACCCCG GTGACCTGGA TCTGACGCCG 
CTGCAACAGG CGGCTGACCC CCTTGAGTGC TACCCCCGAA CCCGTCCCGA GGCGTTGCTC
CCTAGACTCG AGCCGGCAGA GGCGGCCATC GTCAACAAGG TCGTCCTCGA CGCCGGGATC
CTCAGCTGCT TGCCGAAGCT GCGGCTGATC GCCGTTGCGG CTACGGGCAC CAACAACGTG
GACCTGGAAG CCGCCCGGCG GCGGGGCATC ACGGTCACCA ACTGCCAGGA TTACGGCACC
ACGGCCGTCG CTCAGCATAC GCTCACTCTG GTCCTGAACC ATTTCACACG CATCCCGGCG
TTCACCGCCC GGGTTCGGGA CGGGGAGTGG AGCCGGGCGC CGCACTTTAG CCTGATCGAT
CCCGCCCAGC GCGAGATTGC CGGTCGGCGC CTGGGGGTTG TCGGTTACGG CACTCTGGGG
CAGCGGGTTG CGGCGTTTGC GCAAGCCCTC GGCATGGAGG TATGGCTGGC CGAGCGGCCC
TCGGCCCATC GCTGCCGGGT GGGCCGGGTC CCGTTTGACG AGTTGCTGCC GGAAGTGGAC
GTGCTGAGCC TGCATTGCCC GCTGACGGAG GAGACAGCCG GGATGATCGA CGCCGGGGCG
CTGCGGCGAA TGCGCAGCGA TGCACTGCTG GTCAACACCG CCCGGGGGGG ATTGGTGGAT
GAGTCGGCGC TCGCCACGGC ACTGCGGAAC GAAGAGATCG GGGCGGCCGC GCTCGACGTC
CTGACACAGG AACCCCCCCC GCCGGACCAC CCGCTACTGG CCGCGGATCT ACCGAACGTT
ACCGTCACAC CGCACAGCGC TTGGTCGGCG CTGGAGGCGC GACGCCGCAT TGTCGAGCAG
CTGCGCGATA ATCTGGTGGC GTTTGCAACG GGGGGAGTGC CGCCGAATCG GATCATTGGT
CCGGACAGCG ACCTGTGA
 
Protein sequence
MHTVFLDAGS LDPGDLDLTP LQQAADPLEC YPRTRPEALL PRLEPAEAAI VNKVVLDAGI 
LSCLPKLRLI AVAATGTNNV DLEAARRRGI TVTNCQDYGT TAVAQHTLTL VLNHFTRIPA
FTARVRDGEW SRAPHFSLID PAQREIAGRR LGVVGYGTLG QRVAAFAQAL GMEVWLAERP
SAHRCRVGRV PFDELLPEVD VLSLHCPLTE ETAGMIDAGA LRRMRSDALL VNTARGGLVD
ESALATALRN EEIGAAALDV LTQEPPPPDH PLLAADLPNV TVTPHSAWSA LEARRRIVEQ
LRDNLVAFAT GGVPPNRIIG PDSDL