| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hhal_0009 |
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| Symbol | |
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| ID | 4710078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhodospira halophila SL1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008789 |
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| Strand | - |
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| Start bp | 8712 |
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| End bp | 9485 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639854465 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001001606 |
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| Protein GI | 121996819 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.247011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTGGC ATGAGAACGA ACTGGTGGTC GTGACCGGTG GTGGTAGCGG CCTGGGCAGG
GCACTGGTGC GCGGGCTTGC CCGGGACGGA GCCCAGGTGC TCACGGTCGG GCGACGCCCT
GAGGCGCTCG CCGAAACCGC CACCGCCGAT TCAGACCGGA TTCGCACACT CAGCGCGGAT
ATCGCCCATG CTGACGAGCG CGGACACATC ATCGAGGCCG CGCAGGGCTA CACGGTGCGC
GCGGTCATCC ACAATGCCGG TCTTCTCGAT CCGGTGGGAC CGCTCAAGGA CGTGGACCTC
GACGCCTGGC GGAAAGCCAT GGCGGTTAAC GTGGAAGCGC CGGTCTTCCT CAGCCAGGGG
CTGCTGCCAC TCATGGAGCC GGGAAGCCGA ATCCTGCATA TCTCGTCGGG AGCGGCGCAC
AAGCCGTCCA TGGGCTGGGG TGCGTACTGC ACCAGCAAGG CTGCGCTGTT CATGGTCTAC
CAGATCTACC GCGAAGAGTT ATGGCGCGAG GGGATCCTGG TCGGCTCGGT TCGCCCGGGC
GTGGTGGATA CCCCCATGCA GGATCACATC CGGACCCAGA CCCCGGAGCG CTTCCCGGCC
GTGGATCGCT TCATCAAGCT TAAGCAGAAC GGTCAGCTTC ACAGCCCCGA GGACGCTGCC
GACTTCATCC TGTGGGCGTT GCTGGAGACC GGAGATAAAC AGTTCATCGA GCACGAGTGG
AATATCGCTG ACGAGGAGCA CGCCCAGCGA TGGCGGGAGA CACGGCAAGT CTGA
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| Protein sequence | MRWHENELVV VTGGGSGLGR ALVRGLARDG AQVLTVGRRP EALAETATAD SDRIRTLSAD
IAHADERGHI IEAAQGYTVR AVIHNAGLLD PVGPLKDVDL DAWRKAMAVN VEAPVFLSQG
LLPLMEPGSR ILHISSGAAH KPSMGWGAYC TSKAALFMVY QIYREELWRE GILVGSVRPG
VVDTPMQDHI RTQTPERFPA VDRFIKLKQN GQLHSPEDAA DFILWALLET GDKQFIEHEW
NIADEEHAQR WRETRQV
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